Presentation is loading. Please wait.

Presentation is loading. Please wait.

Fig. 1. Neighborhood map (N) and the Shouji bit-vector, for text T=GGTGCAGAGCTC and pattern P=GGTGAGAGTTGT for E = 3. ... Fig. 1. Neighborhood map (N)

Published byBritt-Marie Olofsson Modified over 5 years ago

Similar presentations

Presentation on theme: "Fig. 1. Neighborhood map (N) and the Shouji bit-vector, for text T=GGTGCAGAGCTC and pattern P=GGTGAGAGTTGT for E = 3. ... Fig. 1. Neighborhood map (N)"— Presentation transcript:

1 Fig. 1. Neighborhood map (N) and the Shouji bit-vector, for text T=GGTGCAGAGCTC and pattern P=GGTGAGAGTTGT for E = 3. ... Fig. 1. Neighborhood map (N) and the Shouji bit-vector, for text T=GGTGCAGAGCTC and pattern P=GGTGAGAGTTGT for E = 3. The three common subsequences (i.e. GGTG, AGAG and T) are highlighted in gray. We use a search window of size four columns (two examples of which are highlighted in black) with a step size of a single column. Shouji searches diagonally within each search window for the 4-bit vector that has the largest number of zeros. Once found, Shouji examines if the found 4-bit vector maximizes the number of zeros at the corresponding location of the 4-bit vector in the Shouji bit-vector. If so, then Shouji stores this 4-bit vector in the Shouji bit-vector at its corresponding location Unless provided in the caption above, the following copyright applies to the content of this slide: © The Author(s) Published by Oxford University Press. All rights reserved. For permissions, please article is published and distributed under the terms of the Oxford University Press, Standard Journals Publication Model ( Bioinformatics, btz234, The content of this slide may be subject to copyright: please see the slide notes for details.

2 Fig. 2. Overview of our hardware accelerator architecture
Fig. 2. Overview of our hardware accelerator architecture. The filtering units can be replicated as many times as ... Fig. 2. Overview of our hardware accelerator architecture. The filtering units can be replicated as many times as possible based on the resources available on the FPGA Unless provided in the caption above, the following copyright applies to the content of this slide: © The Author(s) Published by Oxford University Press. All rights reserved. For permissions, please article is published and distributed under the terms of the Oxford University Press, Standard Journals Publication Model ( Bioinformatics, btz234, The content of this slide may be subject to copyright: please see the slide notes for details.

3 Fig. 3. The false accept rate of Shouji, MAGNET, SHD and GateKeeper across 12 real datasets. We use a wide range of ... Fig. 3. The false accept rate of Shouji, MAGNET, SHD and GateKeeper across 12 real datasets. We use a wide range of edit distance thresholds (0–10% of the sequence length) for sequence lengths of (a) 100, (b) 150 and (c) 250 Unless provided in the caption above, the following copyright applies to the content of this slide: © The Author(s) Published by Oxford University Press. All rights reserved. For permissions, please article is published and distributed under the terms of the Oxford University Press, Standard Journals Publication Model ( Bioinformatics, btz234, The content of this slide may be subject to copyright: please see the slide notes for details.

Download ppt "Fig. 1. Neighborhood map (N) and the Shouji bit-vector, for text T=GGTGCAGAGCTC and pattern P=GGTGAGAGTTGT for E = 3. ... Fig. 1. Neighborhood map (N)"

Similar presentations

Unless provided in the caption above, the following copyright applies to the content of this slide: Published by Oxford University Press on behalf of the.

Unless provided in the caption above, the following copyright applies to the content of this slide: Published by Oxford University Press on behalf of the.
Fig. 1. (a) The 10-fold cross validation result of random forest model using an independent population (Austria, ... Fig. 1. (a) The 10-fold cross validation.

Fig. 1. (a) The 10-fold cross validation result of random forest model using an independent population (Austria, ... Fig. 1. (a) The 10-fold cross validation.
Figure 3 Doctors leaving (Matthews, 2013, p.13.)

Figure 3 Doctors leaving (Matthews, 2013, p.13.)
Figure 1 Data-selection process

Figure 1 Data-selection process
Figure 1 Flow diagram detailing the systematic review process.

Figure 1 Flow diagram detailing the systematic review process.
Fig. 1. Axial, coronal, and sagittal views of post hoc results (mean gFA) demonstrating significant differences ... Fig. 1. Axial, coronal, and sagittal.

Fig. 1. Axial, coronal, and sagittal views of post hoc results (mean gFA) demonstrating significant differences ... Fig. 1. Axial, coronal, and sagittal.
Figure 1 Schematic representation of the experimental design.

Figure 1 Schematic representation of the experimental design.
Unless provided in the caption above, the following copyright applies to the content of this slide: Published on behalf of the European Society of Cardiology.

Unless provided in the caption above, the following copyright applies to the content of this slide: Published on behalf of the European Society of Cardiology.
Figure 1 Mechanism of mortality benefit associated with radial access

Figure 1 Mechanism of mortality benefit associated with radial access
Figure 1 Qualitative analysis—themes and subthemes regarding detention minimisation Unless provided in the caption above, the following copyright applies.

Figure 1 Qualitative analysis—themes and subthemes regarding detention minimisation Unless provided in the caption above, the following copyright applies.
Figure 1. Medicaid receipt and ACA favorability

Figure 1. Medicaid receipt and ACA favorability
Figure 1. Mean earnings of men and women over the early career (with 95 per cent confidence intervals) Figure 1. Mean earnings of men and women over the.

Figure 1. Mean earnings of men and women over the early career (with 95 per cent confidence intervals) Figure 1. Mean earnings of men and women over the.
Fig. 1. Relative potency ratios of 13 active ingredients used against a fall armyworm population collected in Puerto ... Fig. 1. Relative potency ratios.

Fig. 1. Relative potency ratios of 13 active ingredients used against a fall armyworm population collected in Puerto ... Fig. 1. Relative potency ratios.
Figure 1 Phases of the research. Author’s own work.

Figure 1 Phases of the research. Author’s own work.
Fig. 1 Bone scintigraphy of the right tibia of the patient at disease onset (A), after 10 years of calcitonin ... Fig. 1 Bone scintigraphy of the right.

Fig. 1 Bone scintigraphy of the right tibia of the patient at disease onset (A), after 10 years of calcitonin ... Fig. 1 Bone scintigraphy of the right.
Unless provided in the caption above, the following copyright applies to the content of this slide: Published by Oxford University Press on behalf of the.

Unless provided in the caption above, the following copyright applies to the content of this slide: Published by Oxford University Press on behalf of the.
Figure 1 Mean (±SE) egg investment in female zebra finches shortly after a second injection with either tetanus toxoid ... Figure 1 Mean (±SE) egg investment.

Figure 1 Mean (±SE) egg investment in female zebra finches shortly after a second injection with either tetanus toxoid ... Figure 1 Mean (±SE) egg investment.
Figure 1 The Kaplan–Meier curves of time to death post first hospitalization. hosp, hospitalization. Unless provided in the caption above, the following.

Figure 1 The Kaplan–Meier curves of time to death post first hospitalization. hosp, hospitalization. Unless provided in the caption above, the following.
AHA: American Heart Association; ALT: ...

AHA: American Heart Association; ALT: ...
Figure 1. Serum ceftazidime concentrations following intravenous administration. Unless provided in the caption above, the following copyright applies.

Figure 1. Serum ceftazidime concentrations following intravenous administration. Unless provided in the caption above, the following copyright applies.

Similar presentations

Ads by Google