1. Copasi exercise Consider the following model Exercise:
A protein can be in any of the following forms: monomer, dimer, trimer
Two monomers form a dimer (reversible reaction)
A monomer and a dimer form a trimer (reversible reaction)
Exercise:
Write the corresponding Copasi model
Indicate reversible reactions wit h = rather than ->
Run a deterministic numerical simulation
Do parameter estimation to find the parameter values and the initial values
Experimental data for the model:
Time is in seconds
Data is in micromoles
Copasi exercise
November 5, 2008 Jelgava, Latvia