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An alignment of vertebrate preproendothelin-1 protein sequences.

Published byDeddy Handoko Lie Modified over 5 years ago

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Presentation on theme: "An alignment of vertebrate preproendothelin-1 protein sequences."— Presentation transcript:

1 An alignment of vertebrate preproendothelin-1 protein sequences.
An alignment of vertebrate preproendothelin-1 protein sequences. (A) Similar amino acid residues [based on the BLOSUM 62 score table (Eddy, 2004)] are highlighted in gray, as compared to human preproendothelin-1. The cleavage sites for furin (inverted triangles) and ECE1 (†) are indicated. Asterisks mark every 20th amino acid. (B) Predicted active EDN1 structure from the killifish, modeled after Webb (Webb, 1997). Amino acids different from human EDN1 are highlighted in gray. Two disulfide bonds are indicated at Cys1–Cys15 and Cys3–Cys10. GenBank and Ensembl accession numbers are listed in Fig. 1, except for platypus EDN1, ENSOANP and opossum EDN1, XP_ Kelly A. Hyndman, and David H. Evans J Exp Biol 2007;210: © The Company of Biologists Limited 2007

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Fig. 4-1, p. 107. Fig. 4-2, p. 109 Fig. 4-3, p. 110.

Fig. 4-1, p Fig. 4-2, p. 109 Fig. 4-3, p. 110.
P.464. Table 13-1, p.465 Fig. 13-1, p.466 Fig. 13-2, p.467.

P.464. Table 13-1, p.465 Fig. 13-1, p.466 Fig. 13-2, p.467.
Fig. 11-1, p. 359. p. 360 Fig. 11-2, p. 361 Fig. 11-3, p. 361.

Fig. 11-1, p p. 360 Fig. 11-2, p. 361 Fig. 11-3, p. 361.
Table 6-1, p. 161. Fig. 6-1, p. 162 p. 163 Fig. 6-2, p. 164.

Table 6-1, p Fig. 6-1, p. 162 p. 163 Fig. 6-2, p. 164.
Construction of Substitution Matrices

Construction of Substitution Matrices
MVKFLFSVIILFFLLSAVGSSARNIEEDGVIRLPSEVKDFINGKNIDDDSVGGTRWAVLI 60 AGSSGYWNYRHQADVCHAYQVLKRGGVKDENIVVFMYDDIALNEENPRPGVIINHPKGED 120 VYAGVPKDYTGRDVTAHNFYSVLLGNKTAVKGGSGKVIDSGPNDHIFIYYSDHGGPGVLG.

MVKFLFSVIILFFLLSAVGSSARNIEEDGVIRLPSEVKDFINGKNIDDDSVGGTRWAVLI 60 AGSSGYWNYRHQADVCHAYQVLKRGGVKDENIVVFMYDDIALNEENPRPGVIINHPKGED 120 VYAGVPKDYTGRDVTAHNFYSVLLGNKTAVKGGSGKVIDSGPNDHIFIYYSDHGGPGVLG.
PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1.

PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1 PfDGAT1-2 AtDGAT1 RcDGAT1 PfDGAT1-1.
LEHNINGER PRINCIPLES OF BIOCHEMISTRY

LEHNINGER PRINCIPLES OF BIOCHEMISTRY
MdSFBB3-alpha MSHVRESETPEDRVVEILSRLPPKSLMRFKCIHKSWFSLINNLSFVAKHLSNSVDNKLSSSTCILLNRSQAHIFPDQSWKQEVFWSMINFSIDSDENNLHYDVEDLN-IP 109 MdSFBB3-beta MSQVHESETPEDKVVEILCRLPPKSLMRFKCIRKSWCTLINRPSFVAKHLNNSVDNKLSSSTCILLNRSQAHIFPDQSWKQEVFWSTINLSIDSDEHNLHYDVEDLI-IP.

MdSFBB3-alpha MSHVRESETPEDRVVEILSRLPPKSLMRFKCIHKSWFSLINNLSFVAKHLSNSVDNKLSSSTCILLNRSQAHIFPDQSWKQEVFWSMINFSIDSDENNLHYDVEDLN-IP 109 MdSFBB3-beta MSQVHESETPEDKVVEILCRLPPKSLMRFKCIRKSWCTLINRPSFVAKHLNNSVDNKLSSSTCILLNRSQAHIFPDQSWKQEVFWSTINLSIDSDEHNLHYDVEDLI-IP.
Supplemental Fig. S1 A B AtMYBS1 3 57 128 180 314 aa AtMYBS2 7 58 112

Supplemental Fig. S1 A B AtMYBS aa AtMYBS
MAKRLVLFATVVIALVALTVAEGEASRQLQCERELQESSLEACRLVVDQQLAGRLPWSTGLQMRCCQQLRDISAKCRPVAVSQVARQYGQ MAKRLVLFATVVIGLVALTVAEGEASRQLQCERELQESSLEACRLVVDQQLAGRLPWSTGLQMRCCQQLRDISAKCRPVAVSQVARQYGQ.

MAKRLVLFATVVIALVALTVAEGEASRQLQCERELQESSLEACRLVVDQQLAGRLPWSTGLQMRCCQQLRDISAKCRPVAVSQVARQYGQ MAKRLVLFATVVIGLVALTVAEGEASRQLQCERELQESSLEACRLVVDQQLAGRLPWSTGLQMRCCQQLRDISAKCRPVAVSQVARQYGQ.
Alignment table: group 4

Alignment table: group 4
Figure 1. Structure of the fly LGR2 gene and the corresponding cDNA sequence. A, Derivation of the fly LGR2 full-length cDNA from the genomic sequence.

Figure 1. Structure of the fly LGR2 gene and the corresponding cDNA sequence. A, Derivation of the fly LGR2 full-length cDNA from the genomic sequence.
Fig. 9. Scatter plots of 500 inferred rates versus their simulated values with a model tree with six sequences and d = 0.1 for (a) ML and (b) EB-EXP. The.

Fig. 9. Scatter plots of 500 inferred rates versus their simulated values with a model tree with six sequences and d = 0.1 for (a) ML and (b) EB-EXP. The.
Fig. 1. (A) The nucleotide and deduced amino acid sequences of the vacuolar serine protease protein of F. proliferatum (Fus p 9.0101, GenBank accession.

Fig. 1. (A) The nucleotide and deduced amino acid sequences of the vacuolar serine protease protein of F. proliferatum (Fus p , GenBank accession.
CHEMISTRY 2 BIOCHEMISTRY.

CHEMISTRY 2 BIOCHEMISTRY.
(a) (b) Figure S1. Amino acid sequence alignment of human and pig FSD2. The amino acid sequence of porcine FSD2 (determined in this study), is aligned.

(a) (b) Figure S1. Amino acid sequence alignment of human and pig FSD2. The amino acid sequence of porcine FSD2 (determined in this study), is aligned.
عناصر المثلثات المتشابهة Parts of Similar Triangles

عناصر المثلثات المتشابهة Parts of Similar Triangles
Fig. 1. NS1 protein alignment and linear epitope mapping of the 10 antibodies used to run the DENV serotype–specific NS1 rapid tests, pan-DENV NS1 test,

Fig. 1. NS1 protein alignment and linear epitope mapping of the 10 antibodies used to run the DENV serotype–specific NS1 rapid tests, pan-DENV NS1 test,
Sequence and comparison of the SDS protein.

Sequence and comparison of the SDS protein.

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