1. Functional classification and visualization of differentially expressed genes.
Functional classification and visualization of differentially expressed genes. (A-C) Gene Ontology Slim classification of the up- and downregulated genes in Myc-induced liver tumors. Red and green bars represent up- and downregulated genes, respectively, in the three categories: biological process (A), cellular component (B) and molecular function (C). Numbers of genes are indicated at the top. (D) Heat map of ribosomal protein mRNA expression profiles. The eight individual samples are indicated at the top of each column and the gene names of ribosomal proteins are given on the right. Red and green represent up- and downregulation as indicated in the bar below. The numbers were calculated by dividing the TPM in one sample by the average TPM of the same transcripts across all eight samples.
Zhen Li et al. Dis. Model. Mech. 2013;6:
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