Presentation is loading. Please wait.

Presentation is loading. Please wait.

Heatmaps reveal significantly affected pathways by 4 mg/liter polymyxin B (PMB) in strains PAK and PAKpmrB6 at 1 h using transcriptomics. Heatmaps reveal.

Published byAudra Peters Modified over 5 years ago

Similar presentations

Presentation on theme: "Heatmaps reveal significantly affected pathways by 4 mg/liter polymyxin B (PMB) in strains PAK and PAKpmrB6 at 1 h using transcriptomics. Heatmaps reveal."— Presentation transcript:

1 Heatmaps reveal significantly affected pathways by 4 mg/liter polymyxin B (PMB) in strains PAK and PAKpmrB6 at 1 h using transcriptomics. Heatmaps reveal significantly affected pathways by 4 mg/liter polymyxin B (PMB) in strains PAK and PAKpmrB6 at 1 h using transcriptomics. Gene names are described under P. aeruginosa PAO1 homologues. Transcriptomic expression counts were normalized by sum and transformed to log2 scale. Decreased gene expression (blue) and increased gene expression (red) (fold change > 2; FDR < 0.05) are indicated. Mei-Ling Han et al. mSystems 2019; doi: /mSystems

Download ppt "Heatmaps reveal significantly affected pathways by 4 mg/liter polymyxin B (PMB) in strains PAK and PAKpmrB6 at 1 h using transcriptomics. Heatmaps reveal."

Similar presentations

Figure S2 A B Log2 Fold Change (+/- cAMP) Transcriptome (9hr)

Figure S2 A B Log2 Fold Change (+/- cAMP) Transcriptome (9hr)
A Systems Toxicology-based Approach Reveals Biological Pathways Dysregulated by Prenatal Arsenic Exposure  Jessica E. Laine, MS, Rebecca C. Fry, PhD 

A Systems Toxicology-based Approach Reveals Biological Pathways Dysregulated by Prenatal Arsenic Exposure  Jessica E. Laine, MS, Rebecca C. Fry, PhD 
Intraset concordancy and transcriptome-proteome discordancy of gene products related to protein translation, OxP, and chaperone proteins. Intraset concordancy.

Intraset concordancy and transcriptome-proteome discordancy of gene products related to protein translation, OxP, and chaperone proteins. Intraset concordancy.
Haem metabolism. Haem metabolism. In all graphs, the genes encoding metabolic enzymes for normal lung (NL) are shown in blue open boxes and data for IPF.

Haem metabolism. Haem metabolism. In all graphs, the genes encoding metabolic enzymes for normal lung (NL) are shown in blue open boxes and data for IPF.
ERVmap reveals additional breast cancer-associated ERVs that correlate with cytolytic activity. ERVmap reveals additional breast cancer-associated ERVs.

ERVmap reveals additional breast cancer-associated ERVs that correlate with cytolytic activity. ERVmap reveals additional breast cancer-associated ERVs.
Patients with SLE have elevated ERV expression.

Patients with SLE have elevated ERV expression.
Similarity of gene expression level (A) and nucleosome occupancy profile (B) between paralog pairs. Similarity of gene expression level (A) and nucleosome.

Similarity of gene expression level (A) and nucleosome occupancy profile (B) between paralog pairs. Similarity of gene expression level (A) and nucleosome.
Study overview. Study overview. (A) Terminal ilea from conventional and GF mice were quantitatively compared to produce the ileum data set. Transcriptomics.

Study overview. Study overview. (A) Terminal ilea from conventional and GF mice were quantitatively compared to produce the "ileum data set." Transcriptomics.
Loss of ACF1 affects transcription prominently in inactive chromatin.

Loss of ACF1 affects transcription prominently in inactive chromatin.
Differential abundance of bacterial families.

Differential abundance of bacterial families.
Metabolic pathway changes of intracellular M. tuberculosis.

Metabolic pathway changes of intracellular M. tuberculosis.
Heat maps of stress- and development-related genes differentially expressed between the osdR mutant and its parent, S. coelicolor M145. Heat maps of stress-

Heat maps of stress- and development-related genes differentially expressed between the osdR mutant and its parent, S. coelicolor M145. Heat maps of stress-
Magnitude of mRNA fold change is best predictor of mRNA-to-protein correlation. Magnitude of mRNA fold change is best predictor of mRNA-to-protein correlation.

Magnitude of mRNA fold change is best predictor of mRNA-to-protein correlation. Magnitude of mRNA fold change is best predictor of mRNA-to-protein correlation.
Selected KEGG genes that were significantly more abundant (>2 log2-fold change; FDR-adjusted P < 0.005) in plastic-associated metagenomic libraries than.

Selected KEGG genes that were significantly more abundant (>2 log2-fold change; FDR-adjusted P < 0.005) in plastic-associated metagenomic libraries than.
Concordance across the transcriptome and proteome data subsets.

Concordance across the transcriptome and proteome data subsets.
Meta-analysis of the Listeriomics transcriptomic data sets.

Meta-analysis of the Listeriomics transcriptomic data sets.
Correlation of mouse gene expression with bacterial gene expression.

Correlation of mouse gene expression with bacterial gene expression.
Presence of motifs correlated with decreased expression of downstream genes. Presence of motifs correlated with decreased expression of downstream genes.

Presence of motifs correlated with decreased expression of downstream genes. Presence of motifs correlated with decreased expression of downstream genes.
Comparison of the global transcriptomes of nine EPEC isolates.

Comparison of the global transcriptomes of nine EPEC isolates.
SEM images of S. aureus ATCC 700699 cells left untreated (A) or treated with polymyxin B (PMB; 99.5 mg/liter) (B), FADDI-019 (1× MIC) (C), FADDI-019 (4×

SEM images of S. aureus ATCC cells left untreated (A) or treated with polymyxin B (PMB; 99.5 mg/liter) (B), FADDI-019 (1× MIC) (C), FADDI-019 (4×

Similar presentations

Ads by Google