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Students Get handout - Chi-square statistical Genetics Problems – due tomorrow Sickle cell video worksheet – due Friday Tomorrow – Genetics of corn Make-up – Friday at 7AM or 3:15PM PSAT skipping #s?? Cell phones in bin…off or muted…please & thank you
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Chi-square (Χ2) Statistical Analysis
Used to determine if observed data are close enough to expected/predicted data Example P: Gg x Gg expect 3:1 G = green g = albino Table 7.3 12 gg Albino 72 GG or Gg Green (o – e) Expected # Observed Genotype Phenotype Total = 63 21 84 9 -9 There is a small difference between observed & expected. Is it close enough to say this is a 3:1 or is there too much variance???? We use the Chi-square test to determine this.
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Chi-square (Χ2) Used to determine if the observed data fall within acceptable limits & tests the validity of a null hypothesis Null hypothesis – states there is NO statistically significant difference between the observed & expected values You MUST write this down EVERY time you do a X2 test! Χ2 = Σ (o – e)2 e o = observed e = expected Σ = sum of values
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Χ2 = Σ Table 7.4 Phenotype observed (o) expected (e) (o – e) (o – e)2
Green 72 63 9 White 12 21 -9 81 1.29 81 3.86 Χ2 = Σ (o – e)2 e = We now compare our calculated Χ2 value with the Critical Values Table Remember: null hypothesis says there is NO significant difference between the observed & expected data.
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Degrees of Freedom (df)
Critical Values of the Chi-Square Distribution Probability (p) Degrees of Freedom (df) 1 2 3 4 5 0.05 3.84 5.99 7.82 9.49 11.1 0.01 6.64 9.21 11.3 13.2 15.1 0.001 10.8 13.8 16.3 18.5 20.5 df = categories – 1 categories = phenotypes = 2 – 1 df = 1 2. p value p = 0.05 for science 3. Compare calculated Χ2 to table 5.15 > 3.84 REJECT null hypothesis…..observed data are not the same as expected Observed data are not a 3:1
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Your turn to calculate Chi-square
Complete “Color of Candy” Guesstimate the %ages of each color & fill in “Percentage Expected” must = 100% 3. Now complete “Number Observed” (o) 4. Now complete last column (e)…do NOT round, keep the decimal Transfer your answers to Table 2 & calculate chi-square Omit #3 of “Procedure” Complete ALL questions on both sheets & staple into Lab Notebook In future chi-square problems… you may find it easier to work across the row instead of column
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