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STATISTICS Univariate Distributions

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1 STATISTICS Univariate Distributions
Professor Ke-Sheng Cheng Department of Bioenvironmental Systems Engineering National Taiwan University 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

2 Probability density functions of discrete random variables
Discrete uniform distribution Bernoulli distribution Binomial distribution Negative binomial distribution Geometric distribution Hypergeometric distribution Poisson distribution 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

3 Discrete uniform distribution
N ranges over the possible integers. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

4 Bernoulli distribution
1-p is often denoted by q. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

5 Binomial distribution
Binomial distribution represents the probability of having exactly x success in n independent and identical Bernoulli trials. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

6 Negative binomial distribution
Negative binomial distribution represents the probability of achieving the r-th success in x independent and identical Bernoulli trials. Unlike the binomial distribution for which the number of trials is fixed, the number of successes is fixed and the number of trials varies from experiment to experiment. The negative binomial random variable represents the number of trials needed to achieve the r- th success. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

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8 Geometric distribution
Geometric distribution represents the probability of obtaining the first success in x independent and identical Bernoulli trials. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

9 Hypergeometric distribution
where M is a positive integer, K is a nonnegative integer that is at most M, and n is a positive integer that is at most M. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

10 Let X denote the number of defective products in a sample of size n when sampling without replacement from a box containing M products, K of which are defective. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

11 Poisson distribution The Poisson distribution provides a realistic model for many random phenomena for which the number of event occurrences within a given scope (time, length, area, volume) is of interest. For example, the number of fatal traffic accidents per day in Taipei, the number of meteorites that collide with a satellite during a single orbit, the number of defects per unit of some material, the number of flaws per unit length of some wire, etc. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

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13 Assume that we are observing the number of occurrences of a certain event in time, space, region or length. Also assume that there exists a positive quantity which satisfies the following properties: 1. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

14 2. 3. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

15 The probability of success (occurrence) in each independent trial.
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

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20 Comparison of Poisson and Binomial distributions
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

21 Example Suppose that the average number of telephone calls arriving at the switchboard of a company is 30 calls per hour. Assuming telephone call occurrences are rare and can be modeled by a Poisson distribution. What is the probability that no calls will arrive in a 3-minute period? What is the probability that more than five calls will arrive in a 5-minute interval? 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

22 Assuming time is measured in minutes
Poisson distribution is NOT a good approximation of the binomial distribution in this case. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

23 Assuming time is measured in seconds
Poisson distribution is a good approximation of the binomial distribution. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

24 is the mean rate of occurrence when observation scale is used.
The first property provides the basis for transferring the mean rate of occurrence between different observation scales. The “small time interval of length h” can be measured in different observation scales. represents number of observations if (in unit of time) is chosen as the scale of observation (or conducting a random experiment). is the mean rate of occurrence when observation scale is used. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

25 If the first property holds for various observation scales, say , then it implies the probability of exactly one happening in a small time interval h can be approximated by The probability of more than one happenings in time interval h is negligible. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

26 i represents the average rate of occurrence (or success) within an interval of i. Within the interval of i , the probability of more than one occurrence is negligible. It is equivalent to say that a Bernoulli random experiment, with a probability of success i , is conducted once per i unit of time. Whether the phenomenon under investigation can be modeled as a Poisson process is dependent on our choice of scale of observation. The Poisson assumption is valid only if, under the chosen scale of observation, the occurrence of an event is rare, i.e., probability of more than one occurrence is negligible. Definition of a rare event is dependent on the scale of observation. For example, typhoon occurrences cannot be considered as rare if they are observed on an annual basis. However, typhoons occurrences are rare, if observed on a weekly basis. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

27 probability that more than five calls will arrive in a 5-minute interval
Occurrences of events which can be characterized by the Poisson distribution is known as the Poisson process. If the problem is treated by considering a binomial distribution of n=5 and p=0.5. What is the probability of having more than five calls in a 5-minute interval? 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

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30 Probability density functions of continuous random variables
Uniform or rectangular distribution Normal distribution (also known as the Gaussian distribution) Exponential distribution (or negative exponential distribution) Gamma distribution (Pearson Type III) Lognormal distribution 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

31 Uniform or rectangular distribution
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32 PDF of U(a,b) 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

33 Normal distribution (Gaussian distribution)
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

34 Z 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

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37 Z~N(0,1) X~N(μ1, σ1) Y~N(μ2, σ2) 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

38 Commonly used values of normal distributions
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

39 Exponential distribution (negative exponential distribution)
Mean rate of occurrence in a Poisson process. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

40 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

41 Gamma distribution represents the mean rate of occurrence in a Poisson process. is equivalent to  in the exponential density. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

42 The exponential distribution is a special case of gamma distribution with
The sum of n independent identically distributed exponential random variables with parameter has a gamma distribution with parameters 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

43 Pearson Type III distribution (PT3)
, and are the mean, standard deviation and skewness coefficient of X, respectively. It reduces to Gamma distribution if = 0. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

44 The Pearson type III distribution is widely applied in stochastic hydrology.
Total rainfall depths of storm events can be characterized by the Pearson type III distribution. Annual maximum rainfall depths are also often characterized by the Pearson type III or log- Pearson type III distribution. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

45 Log-Normal Distribution Log-Pearson Type III Distribution (LPT3)
A random variable X is said to have a log- normal distribution if Log(X) is distributed with a normal density. A random variable X is said to have a Log- Pearson type III distribution if Log(X) has a Pearson type III distribution. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

46 Lognormal distribution
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

47 Approximations between random variables
Approximation of binomial distribution by Poisson distribution Approximation of binomial distribution by normal distribution Approximation of Poisson distribution by normal distribution 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

48 Approximation of binomial distribution by Poisson distribution
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

49 Approximation of binomial distribution by normal distribution
Let X have a binomial distribution with parameters n and p. If , then for fixed a<b, is the cumulative distribution function of the standard normal distribution. It is equivalent to say that as n approaches infinity X can be approximated by a normal distribution with mean np and variance npq. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

50 Approximation of Poisson distribution by normal distribution
Let X have a Poisson distribution with parameter . If , then for fixed a<b It is equivalent to say that as  approaches infinity X can be approximated by a normal distribution with mean  and variance . 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

51 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

52 Example Suppose that two fair dice are tossed 600 times. Let X denote the number of times that a total of 7 dots occurs. What is the probability that ? 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

53 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

54 Transformation of random variables
[Theorem] Let X be a continuous RV with density fx. Let Y=g(X), where g is strictly monotonic and differentiable. The density for Y, denoted by fY, is given by 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

55 Proof: Assume that Y=g(X) is a strictly monotonic increasing function of X.
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

56 Example Let X be a gamma random variable with
Y is also a gamma random variable with scale parameter 1/ and shape parameter . 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

57 Definition of the location parameter
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

58 Example of location parameter
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

59 Definition of the scale parameter
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

60 Example of scale parameter
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

61 X 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

62 Simulation Given a random variable X with CDF FX(x), there are situations that we want to obtain a set of n random numbers (i.e., a random sample of size n) from FX(.) . The advances in computer technology have made it possible to generate such random numbers using computers. The work of this nature is termed “simulation”, or more precisely “stochastic simulation”. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

63 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

64 Pseudo-random number generation
Pseudorandom number generation (PRNG) is the technique of generating a sequence of numbers that appears to be a random sample of random variables uniformly distributed over (0,1). 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

65 A commonly applied approach of PRNG starts with an initial seed and the following recursive algorithm (Ross, 2002) modulo m where a and m are given positive integers, and the above equation means that is divided by m and the remainder is taken as the value of 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

66 The quantity is then taken as an approximation to the value of a uniform (0,1) random variable.
Such algorithm will deterministically generate a sequence of values and repeat itself again and again. Consequently, the constants a and m should be chosen to satisfy the following criteria: For any initial seed, the resultant sequence has the “appearance” of being a sequence of independent uniform (0,1) random variables. For any initial seed, the number of random variables that can be generated before repetition begins is large. The values can be computed efficiently on a digital computer. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

67 A guideline for selection of a and m is that m be chosen to be a large prime number that can be fitted to the computer word size. For a 32- bit word computer, m = and a = result in desired properties (Ross, 2002). 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

68 Simulating a continuous random variable
probability integral transformation 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

69 The cumulative distribution function of a continuous random variable is a monotonic increasing function. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

70 Example Generate a random sample of random variable V which has a uniform density over (0, 1). Convert to using the above V- to-X transformation. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

71 Random number generation in R
R commands for stochastic simulation (for normal distribution pnorm – cumulative probability qnorm – quantile function rnorm – generating a random sample of a specific sample size dnorm – probability density function For other distributions, simply change the distribution names. For examples, (punif, qunif, runif, and dunif) for uniform distribution and (ppois, qpois, rpois, and dpois) for Poisson distribution. 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

72 Generating random numbers of discrete distribution in R
Discrete uniform distribution R does not provide default functions for random number generation for the discrete uniform distribution. However, the following functions can be used for discrete uniform distribution between 1 and k. rdu<-function(n,k) sample(1:k,n,replace=T) # random number ddu<-function(x,k) ifelse(x>=1 & x<=k & round(x)==x,1/k,0) # density pdu<-function(x,k) ifelse(x<1,0,ifelse(x<=k,floor(x)/k,1))  # CDF qdu <- function(p, k) ifelse(p <= 0 | p > 1, return("undefined"), ceiling(p*k)) # quantile 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

73 Similar, yet more flexible, functions are defined as follows
dunifdisc<-function(x, min=0, max=1) ifelse(x>=min & x<=max & round(x)==x, 1/(max-min+1), 0) >dunifdisc(23,21,40) >dunifdisc(c(0,1)) punifdisc<-function(q, min=0, max=1) ifelse(q<min, 0, ifelse(q>max, 1, floor(q-min+1)/(max-min+1))) >punifdisc(0.2) >punifdisc(5,2,19) qunifdisc<-function(p, min=0, max=1) floor(p*(max-min+1))+min >qunifdisc( ,2,19) >qunifdisc(0.2) runifdisc<-function(n, min=0, max=1) sample(min:max, n, replace=T) >runifdisc(30,2,19) >runifdisc(30) 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

74 Binomial distribution
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

75 Negative binomial distribution
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

76 Geometric distribution
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

77 Hypergeometric distribution
8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

78 Poisson distribution 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

79 An example of stochastic simulation
The travel time from your home (or dormitory) to NTU campus may involve a few factors: Walking to bus stop (stop for traffic lights, crowdedness on the streets, etc.) Transportation by bus Stop by 7-11 or Starbucks for breakfast (long queue) Walking to campus 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

80 All Xi’s are independently distributed.
Gamma distribution with mean 30 minutes and standard deviation 10 minutes. Exponential distribution with a mean of 20 minutes. All Xi’s are independently distributed. If you leave home at 8:00 a.m. for a class session of 9:10, what is the probability of being late for the class? 8/30/2019 Laboratory for Remote Sensing Hydrology and Spatial Modeling, Dept. of Bioenvironmental Systems Engineering, NTU

81 The Acceptance/Rejection Method
This method uses an auxiliary density for generation of random quantities from another distribution. This method is particularly useful for generating random numbers of random variables whose cumulative distribution functions cannot be expressed in closed form.

82 Suppose that we want to generate random numbers of a random variable X with density f(X).
An auxiliary density g(X) which we know how to generate random samples is identified and cg(X) is everywhere no less than f(X) for some constant c, i.e.,

83 cg(X) f(X) X

84 Generate a random number x of density g(X),
Generate a random number u from the density U[0,cg(x)), Reject x if u > f(x); otherwise, x is accepted as a random number form f(X), Repeat the above steps until the desired number of random numbers are obtained.

85 8/30/2019 Dept. of Bioenvironmental Systems Engineering, National Taiwan University

86 8/30/2019 Dept. of Bioenvironmental Systems Engineering, National Taiwan University


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