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Taxonomic composition over time was determined by (A) metagenomic sequencing and (B) qualitative culturomics. Taxonomic composition over time was determined by (A) metagenomic sequencing and (B) qualitative culturomics. (C) Shannon index of diversity was calculated using species data from metagenomic sequencing. Species composition was significantly different after Amox-Clav by type II Adonis test of Bray-Curtis distance (P < 0.01). The most obvious change post-Amox-Clav was a Proteobacteria bloom in subject 8. Numbers preceded by “S” at the top of columns indicate participant identification number. Christopher Bulow et al. mSphere 2018; doi: /mSphereDirect
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