1. RNA-seq analysis from the MVI-it culture indicates that a majority of the BGHV8 coding sequences are transcribed.
RNA-seq analysis from the MVI-it culture indicates that a majority of the BGHV8 coding sequences are transcribed. (A) Screen shot of RNA-seq reads mapped to each CDS of the BGHV8 genome. The data are presented in the Lightweight Genome Viewer (lwgv). The y axis is a log10 coverage scale, and the genomic position is displayed on the x axis. Interactive access to the coverage data across the BGHV8 genome is available at (B) Reads per kilobase of transcript per million mapped reads (RPKM) for each CDS of BGHV8 are displayed. (C) A heat map imposed on the BGHV8 genome also illustrates the relative expression of each CDS. Green denotes the lowest RPKM values, yellow/orange indicates intermediate RPKM values, and red indicates the highest RPKM values. Raw reads and RPKM data are available through GEO (GSE76756).
Reed S. Shabman et al. mSphere 2016; doi: /mSphere