1. Molecular phylogenetic analysis of RNA polymerase II largest-subunit protein sequences from various trichomonads, including D. fragilis.
Molecular phylogenetic analysis of RNA polymerase II largest-subunit protein sequences from various trichomonads, including D. fragilis. The GenBank accession number for each sequence is shown in parentheses. The evolutionary history was inferred by using the maximum likelihood method based on the Jones, Taylor, Thornton (JTT) matrix-based model (199). The percentage of trees in which the associated taxon cluster together is shown next to the branches. Evolutionary analyses were conducted with MEGA6 (200). The robustness of the tree was assessed by using the bootstrap method with 1,000 replicates.
Damien Stark et al. Clin. Microbiol. Rev. 2016; doi: /CMR