1. Conformational B cell epitopes of MAP3651c (fadE2_2) predicted from the 3D structure template under PDB ID 2PGO (a crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus).
Conformational B cell epitopes of MAP3651c (fadE2_2) predicted from the 3D structure template under PDB ID 2PGO (a crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus). In the ball-and-stick model, yellow balls are the residues of predicted epitopes (E1 to E10) and white sticks are the structures for nonepitope and core residues. Each epitope is shown with predicted residues (abbreviated amino acids) and residue positions (superscript numerals): E1, RESVR16–20; E2, A396-LVTRGGI399–405; E3, YAQQRESFGQPIWQHQSVGNY286–306; E4, LPDPDSDG160–167; E5, TDPKATP192–198; E6, GGY361–363-YSQEY365–369; E7, V7-AQQVDV9–14-WAQ21–23; E8, G213-GN236–237; E9, MGANS1–5; and E10, NDE25–27.
Ratna B. Gurung et al. Clin. Vaccine Immunol. 2012; doi: /CVI