1. (A and B) Maximum-likelihood trees of 28 strains of Pantoea agglomerans and closely related species, constructed using concatenated sequences of six protein-coding genes (fusA, gyrB, leuS, pyrG, rplB, and rpoB) (A) and 16S rRNA sequences (B) based on the general time-reversible model of nucleotide substitution, which was inferred to be the most likely using MODELTEST. (C) Split decomposition analysis tree of the 20 strains of P. agglomerans and 2 P. agglomerans-like strains.
(A and B) Maximum-likelihood trees of 28 strains of Pantoea agglomerans and closely related species, constructed using concatenated sequences of six protein-coding genes (fusA, gyrB, leuS, pyrG, rplB, and rpoB) (A) and 16S rRNA sequences (B) based on the general time-reversible model of nucleotide substitution, which was inferred to be the most likely using MODELTEST. (C) Split decomposition analysis tree of the 20 strains of P. agglomerans and 2 P. agglomerans-like strains. Circles and triangles represent P. agglomerans groups I and II, respectively. The two P. agglomerans-like strains, PA5 and SB547, are in the rectangle. The numbers at the nodes are bootstrap values higher than 80%, obtained after 1,000 replicates.
Alexis Delétoile et al. J. Clin. Microbiol. 2009; doi: /JCM