Presentation is loading. Please wait.

Presentation is loading. Please wait.

Relative abundances of bacterial/archaeal groups in 16S rRNA data set.

Published byScott Marsh Modified over 5 years ago

Similar presentations

Presentation on theme: "Relative abundances of bacterial/archaeal groups in 16S rRNA data set."— Presentation transcript:

1 Relative abundances of bacterial/archaeal groups in 16S rRNA data set.
Relative abundances of bacterial/archaeal groups in 16S rRNA data set. (A) Microbial taxonomy summarized at phylum level. (B) Microbial taxonomy summarized at the class level; the legend displays only the top 15 most abundant taxa in the bar chart. Plots were generated in QIIME using abundance-filtered OTU tables with control OTUs subtracted. MH, Marble Hill; S., South; W., West. Holly M. Bik et al. mSphere 2016; doi: /mSphere

Download ppt "Relative abundances of bacterial/archaeal groups in 16S rRNA data set."

Similar presentations

M. Malone, K. Johani, S. O. Jensen, I. B. Gosbell, H. G. Dickson, H

M. Malone, K. Johani, S. O. Jensen, I. B. Gosbell, H. G. Dickson, H
X AND R CHART EXAMPLE IN-CLASS EXERCISE

X AND R CHART EXAMPLE IN-CLASS EXERCISE
Taxonomic composition of subway microbial communities.

Taxonomic composition of subway microbial communities.
Exploration of the data set with age as a continuous variable.

Exploration of the data set with age as a continuous variable.
Microbial community dissimilarity.

Microbial community dissimilarity.
Composition of microbial communities in induced sputa of healthy and mild, moderate, severe or very severe (end-stage) lung disease affected individuals.

Composition of microbial communities in induced sputa of healthy and mild, moderate, severe or very severe (end-stage) lung disease affected individuals.
Relative abundances of the top 10 most abundant OTUs across all fish samples are shown along with the data from the probiotic B. pumilus RI06-95 (OTU 3673)

Relative abundances of the top 10 most abundant OTUs across all fish samples are shown along with the data from the probiotic B. pumilus RI06-95 (OTU 3673)
Effect of protocol modifications.

Effect of protocol modifications.
Inference of Environmental Factor-Microbe and Microbe-Microbe Associations from Metagenomic Data Using a Hierarchical Bayesian Statistical Model  Yuqing.

Inference of Environmental Factor-Microbe and Microbe-Microbe Associations from Metagenomic Data Using a Hierarchical Bayesian Statistical Model  Yuqing.
Map and population demographic metadata of sample sites in New York City. Map and population demographic metadata of sample sites in New York City. Microbial.

Map and population demographic metadata of sample sites in New York City. Map and population demographic metadata of sample sites in New York City. Microbial.
Microbial diversity of the 10 body locations sampled.

Microbial diversity of the 10 body locations sampled.
(a) Bifurcating tree generated from hierarchical clustering of OTUs based on mean pH. (a) Bifurcating tree generated from hierarchical clustering of OTUs.

(a) Bifurcating tree generated from hierarchical clustering of OTUs based on mean pH. (a) Bifurcating tree generated from hierarchical clustering of OTUs.
Titration of antibiotic perturbations results in altered community structures and C. difficile colonization resistance. Titration of antibiotic perturbations.

Titration of antibiotic perturbations results in altered community structures and C. difficile colonization resistance. Titration of antibiotic perturbations.
Putative MBTA microbial community sources.

Putative MBTA microbial community sources.
Nonmetric multidimensional scaling (NMDS) plots of fecal and biopsy sample-based Bray-Curtis distances computed from the relative abundances of the 258.

Nonmetric multidimensional scaling (NMDS) plots of fecal and biopsy sample-based Bray-Curtis distances computed from the relative abundances of the 258.
Family level bar plots generated in QIIME 1. 9

Family level bar plots generated in QIIME 1. 9
Positions of LSUCC isolates relative to matching OTUs within the top 60 ranks for the most successful experiment, CJ2, which is enlarged to allow for OTU.

Positions of LSUCC isolates relative to matching OTUs within the top 60 ranks for the most successful experiment, CJ2, which is enlarged to allow for OTU.
Heatmaps of differential OTUs

Heatmaps of differential OTUs
Example usage of mockrobiota MC resource for marker gene and metagenome sequencing pipelines. Example usage of mockrobiota MC resource for marker gene.

Example usage of mockrobiota MC resource for marker gene and metagenome sequencing pipelines. Example usage of mockrobiota MC resource for marker gene.
Differential relative abundance of major taxa for successive pairwise comparisons. Differential relative abundance of major taxa for successive pairwise.

Differential relative abundance of major taxa for successive pairwise comparisons. Differential relative abundance of major taxa for successive pairwise.

Similar presentations

Ads by Google