1. Prepare a 10’talk for Friday Feb 27 on plant defense responses or describe interactions between plants & pathogens or symbionts Plant defense responses Hypersensitive response Hypersensitive response Systemic acquired resistance Systemic acquired resistance Innate immunity Innate immunity Phytoalexin synthesis Phytoalexin synthesis Defensins and other proteins Defensins and other proteins Oxidative burst Oxidative burst Some possible pathogens Agrobacterium tumefaciens Agrobacterium tumefaciens Agrobacterium rhizogenes Agrobacterium rhizogenes Pseudomonas syringeae Pseudomonas syringeae Pseudomonas aeruginosa Pseudomonas aeruginosa Viroids Viroids DNA viruses DNA viruses RNA viruses RNA viruses Fungi Fungi Oomycetes Oomycetes Some possible symbionts N-fixing bacteria N-fixing bacteria N-fixing cyanobacteria N-fixing cyanobacteria Endomycorrhizae Endomycorrhizae Ectomycorrhizae Ectomycorrhizae

2. Growth regulators 1.Auxins 2.Cytokinins 3.Gibberellins 4.Abscisic Acid 5.Ethylene 6.Brassinoteroids 7.Jasmonic Acid 8.Salicylic Acid 9.Strigolactones 10.Nitric Oxide 11.Sugars

3. Auxin signaling Auxin receptors eg TIR1 are E3 ubiquitin ligases! Upon binding auxin they activate complexes targeting AUX/IAA proteins for degradation! AUX/IAA inhibit ARF transcription factors, so this turns on "early genes" Some early genes turn on 'late genes" needed for development

4. Auxin signaling ABP1 is a different IAA receptor localized in ER Activates PM H+ pump by sending it to PM & keeping it there Does not affect gene expression!

5. Auxin & other growth regulators Some "late genes" synthesize ethylene (normally a wounding response): how 2,4-D kills? Auxin/cytokinin determines whether callus forms roots or shoots

6. Cytokinins Discovered as factors which induce cultured cells to divide Haberlandt (1913): phloem chemical stimulates division

7. Cytokinins Discovered as factors which induce cultured cells to divide Haberlandt (1913): phloem chemical stimulates division van Overbeek (1941): coconut milk stimulates division

8. Cytokinins Discovered as factors which induce cultured cells to divide Haberlandt (1913): phloem chemical stimulates division van Overbeek (1941): coconut milk stimulates division Miller… Skoog (1955): degraded DNA stimulates division!

9. Cytokinins Discovered as factors which induce cultured cells to divide Haberlandt (1913): phloem chemical stimulates division van Overbeek (1941): coconut milk stimulates division Miller… Skoog (1955): degraded DNA stimulates division! Kinetin was the breakdown product

10. Cytokinins Discovered as factors which induce cultured cells to divide Haberlandt (1913): phloem chemical stimulates division van Overbeek (1941): coconut milk stimulates division Miller… Skoog (1955): degraded DNA stimulates division! Kinetin was the breakdown product Derived from adenine

11. Cytokinins Discovered as factors which induce cultured cells to divide Haberlandt (1913): phloem chemical stimulates division van Overbeek (1941): coconut milk stimulates division Miller… Skoog (1955): degraded DNA stimulates division! Kinetin was the breakdown product Derived from adenine Requires auxin to stimulate division

12. Cytokinins Requires auxin to stimulate division Kinetin/auxin determines tissue formed (original fig)

13. Cytokinins Requires auxin to stimulate division Kinetin/auxin determines tissue formed Inspired search for natural cytokinins Miller& Letham (1961) ± simultaneously found zeatin in corn Kinetin trans- Zeatin

14. Cytokinins Miller& Letham (1961) ± simultaneously found zeatin Later found in many spp including coconut milk Kinetin trans-Zeatin

15. Cytokinins Miller& Letham (1961) ± simultaneously found zeatin Later found in many spp including coconut milk Trans form is more active, but both exist (& work) Many other natural & synthetics have been identified

16. Cytokinins Many other natural & synthetics have been identified Like auxins, many are bound to sugars or nucleotides

17. Cytokinins Many other natural & synthetics have been identified Like auxins, many are bound to sugars or nucleotides Inactive, but easily converted

18. Cytokinin Synthesis Most cytokinins are made at root apical meristem & transported to sinks in xylem

19. Cytokinin Synthesis Most cytokinins are made at root apical meristem & transported to sinks in xylem Therefore have inverse gradient with IAA

20. Cytokinin Synthesis Most cytokinins are made at root apical meristem & transported to sinks in xylem Therefore have inverse gradient with IAA Why IAA/CK affects development

21. Cytokinin Synthesis Most cytokinins are made at root apical meristem & transported to sinks in xylem Therefore have inverse gradient with IAA Why IAA/CK affects development Rapidly metabolized by sink

22. Cytokinin Effects Regulate cell division Need mutants defective in CK metabolism or signaling to detect this in vivo

23. Cytokinin Effects Regulate cell division Need mutants defective in CK metabolism or signaling to detect this in vivo SAM & plants are smaller when [CK]

24. Cytokinin Effects SAM & plants are smaller when [CK] Roots are longer!

25. Cytokinin Effects Usually roots have too much CK: inhibits division! Cytokinins mainly act @ root & shoot meristems

26. Cytokinin Effects Cytokinins mainly act @ root & shoot meristems Control G1-> S & G2-> M transition

27. Cytokinin Effects Promote lateral bud growth

28. Cytokinin Effects Promote lateral bud growth Delay leaf senescence

29. Cytokinin Effects Promote lateral bud growth Delay leaf senescence Promote cp development, even in dark

30. Cytokinin Receptors Receptors were identified by mutation Resemble bacterial 2-component signaling systems

31. Cytokinin Action 1.Cytokinin binds receptor's extracellular domain

32. Cytokinin Action 1.Cytokinin binds receptor's extracellular domain 2. Activated protein kinases His kinase & receiver domains

33. Cytokinin Action 1.Cytokinin binds receptor's extracellular domain 2. Activated protein kinases His kinase & receiver domains 3. Receiver kinases His-P transfer relay protein (AHP)

34. Cytokinin Action 1.Cytokinin binds receptor's extracellular domain 2. Activated protein kinases His kinase & receiver domains 3. Receiver kinases His-P transfer relay protein (AHP) 4. AHP-P enters nucleus & kinases ARR response regulators

35. Cytokinin Action 4. AHP-P enters nucleus & kinases ARR response regulators 5. Type B ARR induce type A

36. Cytokinin Action 4. AHP-P enters nucleus & kinases ARR response regulators 5. Type B ARR induce type A 6. Type A create cytokinin responses

37. Cytokinin Action 4. AHP-P enters nucleus & kinases ARR response regulators 5. Type B ARR induce type A 6. Type A create cytokinin responses 7. Most other effectors are unknown but D cyclins is one effect.

38. Auxin & other growth regulators Some "late genes" synthesize ethylene (normally a wounding response): how 2,4-D kills? Auxin/cytokinin determines whether callus forms roots or shoots Auxin induces Gibberellins

39. Gibberellins Discovered by studying "foolish seedling" disease in rice Hori (1898): caused by a fungus

40. Gibberellins Discovered by studying "foolish seedling" disease in rice Hori (1898): caused by a fungus Sawada (1912): growth is caused by fungal stimulus

41. Gibberellins Discovered by studying "foolish seedling" disease in rice Hori (1898): caused by a fungus Sawada (1912): growth is caused by fungal stimulus Kurosawa (1926): fungal filtrate causes these effects

42. Gibberellins Discovered by studying "foolish seedling" disease in rice Kurosawa (1926): fungal filtrate causes these effects Yabuta (1935): purified gibberellins from filtrates of Gibberella fujikuroi cultures

43. Gibberellins Discovered by studying "foolish seedling" disease in rice Kurosawa (1926): fungal filtrate causes these effects Yabuta (1935): purified gibberellins from filtrates of Gibberella fujikuroi cultures Discovered in plants in 1950s

44. Gibberellins Discovered in plants in 1950s "rescued" some dwarf corn & pea mutants

45. Gibberellins Discovered in plants in 1950s "rescued" some dwarf corn & pea mutants Made rosette plants bolt

46. Gibberellins Discovered in plants in 1950s "rescued" some dwarf corn & pea mutants Made rosette plants bolt Trigger adulthood in ivy & conifers

47. Gibberellins "rescued" some dwarf corn & pea mutants Made rosette plants bolt Trigger adulthood in ivy & conifers Induce growth of seedless fruit

48. Gibberellins "rescued" some dwarf corn & pea mutants Made rosette plants bolt Trigger adulthood in ivy & conifers Induce growth of seedless fruit Promote seed germination

49. Gibberellins "rescued" some dwarf corn & pea mutants Made rosette plants bolt Trigger adulthood in ivy & conifers Induce growth of seedless fruit Promote seed germination Inhibitors shorten stems: prevent lodging

50. Gibberellins "rescued" some dwarf corn & pea mutants Made rosette plants bolt Trigger adulthood in ivy & conifers Induce growth of seedless fruit Promote seed germination Inhibitors shorten stems: prevent lodging >136 gibberellins (based on structure)!

51. Gibberellins >136 gibberellins (based on structure)! Most plants have >10

52. Gibberellins >136 gibberellins (based on structure)! Most plants have >10 Activity varies dramatically!

53. Gibberellins >136 gibberellins (based on structure)! Most plants have >10 Activity varies dramatically! Most are precursors or degradation products

54. Gibberellins >136 gibberellins (based on structure)! Most plants have >10 Activity varies dramatically! Most are precursors or degradation products GAs 1, 3 & 4 are most bioactive

55. Gibberellin signaling Used mutants to learn about GA signaling

56. Gibberellin signaling Used mutants to learn about GA signaling Many are involved in GA synthesis

57. Gibberellin signaling Used mutants to learn about GA signaling Many are involved in GA synthesis Varies during development

58. Gibberellin signaling Used mutants to learn about GA signaling Many are involved in GA synthesis Varies during development Others hit GA signaling Gid = GA insensitive

59. Gibberellin signaling Used mutants to learn about GA signaling Many are involved in GA synthesis Varies during development Others hit GA signaling Gid = GA insensitive encode GA receptors

60. Gibberellin signaling Used mutants to learn about GA signaling Many are involved in GA synthesis Varies during development Others hit GA signaling Gid = GA insensitive encode GA receptors Sly = E3 receptors

61. Gibberellin signaling Used mutants to learn about GA signaling Many are involved in GA synthesis Varies during development Others hit GA signaling Gid = GA insensitive encode GA receptors Sly = E3 receptors DELLA (eg rga) = repressors of GA signaling

62. Gibberellins GAs 1, 3 & 4 are most bioactive Act by triggering degradation of DELLA repressors

63. Gibberellins GAs 1, 3 & 4 are most bioactive Made at many locations in plant Act by triggering degradation of DELLA repressors w/o GA DELLA binds & blocks activator (GRAS)

64. Gibberellins Act by triggering degradation of DELLA repressors w/o GA DELLA binds & blocks activator bioactive GA binds GID1; GA-GID1 binds DELLA & marks for destruction

65. Gibberellins Act by triggering degradation of DELLA repressors w/o GA DELLA binds & blocks activator bioactive GA binds GID1; GA-GID1 binds DELLA & marks for destruction GA early genes are transcribed, start GA responses