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Published byDante Trescott Modified over 9 years ago
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Presented by: Emily Campbell PI: Dr. Stephen Giovannoni Mentor: Paul Carini Marine Microbiology Lab http://giovannonilab.oregonstate.edu
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Discovered in 1990 by Stephen Giovannoni Most abundant heterotrophic organism in ocean surface waters world wide 1/3 of cells present in ocean surface water Role of SAR11 Dissolved organic carbon cycling SAR11 oxidizes carbon → Releases CO 2 Ocean lacks large quantities of key nutrients CO 2 Organic Carbon AutotrophsHeterotrophs
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Most commonly found as phosphate (PO 4 ) An example of a nutrient found at low concentrations Below 5 nM Required for all living things Nucleotides (DNA and RNA), phospholipids (cell membranes) SAR11 thrives in low phosphate environments
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SAR11 isolate HTCC7211, HTCC1062, HTCC1002
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Hypothesis: Each SAR11 isolate can utilize different phosphorus compounds with varying abilities. Prediction: If the isolate is able to utilize the given phosphorus-containing compound, we expect to observe maximum cell densities in excess of those cultures to which no phosphate has been added.
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Negative ControlPositive ControlTest Compound Count Cells Plot Data
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2-aminoethylphosphate cAMP D-xylulose-phosphate dATP dCTP dGTP dTTP D-Glucose 6 Phosphate 3-glycerophosphate AMP CMP GMP IMP UMP L-O Phosphoserine Methylphosphate Phosphite dibasic pentahydrate Phosphoenol Pyruvate Phosphonoacetic acid Phytic Acid D-ribose-5 phosphate Sodium phosphite dibasic pentahydrate Sodium Phosphonoformate Sodium triphosphate Uridine-5`- diphosphoglucose DNA RNA
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2-aminoethylphosphonic acid dATP dGTP dCTP dTTP Deoxy-xylulose-phosphate UMP GMP D-glucose 6 phosphate 3-glycerophosphate Phosphoenol pyruvate D-ribose-5 phosphate Sodium phosphite dibasic pentahydrate Sodium phosphonoformate HTCC 1062 HTCC 7211 HTCC 1002 2-aminoethylphosphonic acid dGTP dTTP Deoxy-xylulose-phosphate IMP D-ribose-5 phosphate Sodium phosphonoformate Uridine 5’ diphosphoglucose 2-aminoethylphosphonic acid dATP dGTP dCTP dTTP Deoxy-xylulose-phosphate D-glucose 6 Phosphate 3-glycerophosphate Methylphosphonic acid Phosphoenol pyruvate L-O Phosphoserine D-ribose-5 phosphate Sodium phosphite dibasic pentahydrate Shared between all three isolates Shared between HTCC1062 and HTCC7211 Shared between HTCC1062 and HTCC1002 Unique to that isolate
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HTCC7211 HTCC1062 HTCC1002 IMP Uridine 5’ diphosphoglucose 2-aminoethylphosphonate dGTP dTTP D-xylulose-phosphate D-ribose-5 phosphate dATP dCTP D-glucose-6P 3-glycerophosphate PEP Phosphite Methylphosphonate L-O Phosphoserine UMP GMP Phosphonoformate
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Verify results Free phosphorus in stocks Test positive results in triplicate What molecular pathways the compound could be used in What other necessities the phosphorus compound being transported could alleviate
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Dr. Stephen Giovannoni Paul Carini HHMI Dr. Kevin Ahern
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