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European Bioinformatic Institute.

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Presentation on theme: "European Bioinformatic Institute."— Presentation transcript:

1 EMBL (European Molecular Biology Laboratory) Nucleotide Sequence Database

2 European Bioinformatic Institute

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7 http://srs. ebi. ac. uk/srsbin/cgi-bin/wgetz

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10 http://srs. ebi. ac. uk/srsbin/cgi-bin/wgetz

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14 Applications in SRS Sequence BLAST SWISSPROT Pathway Prosite
query BLAST results - text file Run BLAST launch BLAST Indexing Upload user owned data linking Pathway Prosite SWISSPROT

15 Protein Applications in SRS
Homology and similarity tools: BLASTP : database search tool FASTA : database search tool MPSrch Protein function analysis tools: PPSearh : BLASTProdom ScanRegExp FingerPrintScan PfScan InterProScan Sequence analysis tools: - ClustalW

16 Nucleotide applications in SRS
Homology and similarity tools BLASTN NFASTA FASTX FASTY Sequence analysis tools: NClustalW RestrictionMap

17 Integr8 Permite identificar y descargar información genómica para especies que tengan el genoma completo. Integr8 : Biología, analisis genoma y proteoma Los datos se integran a partir de diferentes fuentes: EMBL Nucleotide Sequence Database (EMBL-Bank); Ensembl; the UniProt Knowledge base; InterPro; CluSTr; and the Gene Ontology Annotation database

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