Download presentation
Presentation is loading. Please wait.
Published byJeanette Meadow Modified over 10 years ago
1
Advanced Bioinformatics BIF-30806
2
Welcome
3
Content of the course Basic Linux Perl scripting Open Bioinformatics Software Protein Motifs Protein Interactions Semantic web NGS RNA-seq/splicing Comparative genomics Chip-Seq Project
4
Teachers Jack Leunissen Harm Nijveen Aalt-Jan van Dijk Edouard Severing Elio Schijlen Felipe Leal Valentim Joachim Bargsten Jose Muino Ke Lin Pierre-Yves Chibon Pjotr Prins Sandra Smit Saulo Alves Aflitos Tom de Man
5
Grading Exercises(8) + Perl exam30% Project Report50% Project Presentation20% (inter)active participation during lectures and practical sessions is highly appreciated
6
Hours Mornings: 9 - 12 Afternoon: 13 - 17:15 Coffee/tea breaks as required
7
Location Lectures: PC 771 Practical sessions and project work: PC 771, G 790, G 794, G 795
8
Project Create an analysis pipeline using Perl to answer a biological question 2 weeks Small teams of ~4 students One report and presention per student
9
Perl Introduction to the language Focus on practical use Exercises numbered 1 - 8 should to be mailed before Feb 23 to: harmn@bioinformatics.nlharmn@bioinformatics.nl Written exam after one week
10
Perl Gurus Already a Perl Guru? Then you can skip the Perl classes But: You should hand in the exercise solutions and do the written exam (easy) Overestimation of Perl skills is at your own risk...
Similar presentations
© 2025 SlidePlayer.com. Inc.
All rights reserved.