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Published byNickolas Stevenson Modified over 9 years ago
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“Learning curve” group= 10 pts with mBrCa (ER+ or ER-) who are beginning a new therapy ~5 pts with ≥5CTC/7.5 ml Group 1 5 CTC evaluable pts* with ER+ mBrCa who are beginning a new therapy: If CTC-ETI has been successfully generated in 5/5 pts If CTC-ETI has been successfully generated in ≤ 4/5 pts Proceed to multi-institutional, multi-blood draw pilot study Stage 1 Stage 2 Group 2 5 additional CTC evaluable pts* with ER+ mBrCa who are beginning a new therapy. Combining the findings from group 1+2: If CTC-ETI has been successfully generated in 6/10 pts If CTC-ETI has been successfully generated in 4-5/10 pts If CTC-ETI has been successfully generated in ≤3/10 pts STOP and reconsider methods Group 3 5 CTC additional evaluable pts* with ER+ mBrCa who are beginning a new therapy. Combining the findings from group 1+2+3 (total sample size 15 CTC-evaluable pts): If CTC-ETI has been successfully generated in ≥9/15 pts If CTC-ETI has been successfully generated in ≤8/15 pts STOP and reconsider methods * ≥5CTC/7.5ml WB Figure S1. Clinical trial study design
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MDA-MB-231 MCF-7* Sk-Br-3MDA-MB-231MCF-7 BT-474 MDA-MB-231MCF-7*MDA-453 BT-474 MCF-7 Sk-Br-3 MDA-MB-231 MCF-7* Figure S2. Examples of biomarker staining of cultured human breast cancer cell lines after spike and capture from normal human blood using the CellSearch® system. A semi-quantitative scale was established based on relative expression of each biomarker: negative (0), weak (1+), intermediate (2+), and high (3+). *hormone depleted condition. ER BCL-2 HER-2 Ki67 0 1+ 2+ 3+ Staining Intensity
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Fig. S3. Demonstration of appropriate antibody staining of cultured human breast cancer cells with known positive and negative biomarker expression after spike and capture from normal human blood using the CellSearch ® System. A: ER staining for MCF-7 and Sk-Br-3. B: BCL- 2 staining for MCF-7 and Sk- Br-3. C: HER2 staining for Sk-Br-3 and MCF-7. D: Ki-67 staining for MCF-7.
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% ER pos CTC 86% 0% Composite DAPI Cytokeratin-FITC ER-PE CD45-APC A. Hormone depleted MCF-7 +Anti-ER Ab + no Ab Sk-Br-3 +Anti-ER Ab + no Ab
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% BCL-2 pos CTC 84% 0% Composite DAPI Cytokeratin-FITC BCL2-PE CD45-APC B. MCF-7 +Anti-BCL-2 Ab + no Ab Sk-Br-3 +Anti-BCL-2 Ab + no Ab
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% HER2 pos CTC 100% 0% Composite DAPI Cytokeratin-FITC HER2-PE CD45-APC C. MCF-7 +Anti-HER2 Ab + no Ab Sk-Br-3 +Anti-HER2 Ab + no Ab
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% Ki67 pos CTC 42% 0% Composite DAPI Cytokeratin-FITC Ki67-PE CD45-APC D. MCF-7 +Anti-Ki67 Ab + no Ab
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Figure S4. Composite “CTC-Bio_Score” for different cell lines. A: Hormone deplete MCF-7 cells (Luminal-type). B: MDA-MB-231 ( Basal-like type). C: Sk-Br-3 (HER2 positive) Composite DAPI Cytokeratin-FITC Marker-PE CD45-APC Anti-ER Anti-BCL-2 Anti-HER2 Anti-Ki67 A. >10% % Pos >10% 1% >10% Assigned Bio-Points 0 0 1 2 Total CTC-ETI Bio-Score 3
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Composite DAPI Cytokeratin-FITC Marker-PE CD45-APC Anti-ER Anti-BCL-2 Anti-HER2 Anti-Ki67 B. 0% % Pos 1-10% 0%0% >10% Assigned Bio-Points 6 1 0 2 Total CTC-ETI Bio-Score 9
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Composite DAPI Cytokeratin-FITC Marker-PE CD45-APC Anti-ER Anti-BCL-2 Anti-HER2 Anti-Ki67 C. 0% % Pos 0% >10% Assigned Bio-Points 6 2 2 2 Total CTC-ETI Bio-Score 12
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Composite DAPI Cytokeratin-FITC Marker CD45-APC No nuclear positivity (0) Strong nuclear positivity (2+; 3+) Weak nuclear positivity (1+) Figure S5. Heterogeneity of ER expression within the cultured MCF-7 human breast cancer cell line. Cell line Staining 01+2+3+ MCF-7* + ER PE Ab15%18%67%0% Cells were cultured in hormone depleted media for 48 hours, harvested, and spiked into 7.5 ml of normal human blood. The blood was then processed using CellSearch® and stained for DAPI, CK, CD45, and ER. Examples of strong (2+, 3+), weak (1+), and no staining (0) are displayed. Apparent staining in the bottom panel is due to high gain analysis by the automated fluorescent microscopy, as indicated by very high background.
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Average CTC/7.5 ml WB Coefficient of variation Figure. S6. Coefficient of variation of CTC-enumeration by mean CTC count.
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ER staining Primary Tumor (IHC >95%), 200X ER staining in CTC 1+ 0 3% 50% 11% 36% IF Score % Cells 53% ER positive 47% ER negative Figure. S7. Heterogeneity between primary tissue and CTC for patient #4. The CTC galleries displayed were selected from over 1,000 images to illustrate CTC-ER heterogeneity. Composite DAPI Cytokeratin-FITC ER-PE CD45-APC 3+ 2+
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