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Analysis of plankton by flow cytometry.

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Presentation on theme: "Analysis of plankton by flow cytometry."— Presentation transcript:

1 Analysis of plankton by flow cytometry

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8 Sampling Fresh sample Unstained samples

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10 Fixation Sampling Fresh sample Unstained samples

11 Paraformaldehyde fixation

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13 Sampling Fresh sampleFixation Unstained samples Freezing -80°C Thawing Stained samples

14 Fluorescent dyes used for the analysis of nucleic acids of marine samples BO-PRO-1 PO-PRO-1 TO-PRO-1 YO-PRO-1 BOBO-1 POPO-1 TOTO-1 YOYO-1 SYTOSYTO SYTOX Green PicoGreen SYBR Green-I Acridine Orange Propidium iodide Ethidium bromide Chromomycin A3 Mythramycin DAPI Hoechst 33342 Hoechst 33258 SYBR Green-II OliGreen RiboGreen

15 Bacterial Staining: SYBR Green-I

16 Addition of beads Sampling Fresh sampleFixation Freezing -80°C Thawing Stained samples Unstained samples

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18 Sampling Fresh sampleFixation Freezing -80°C Thawing Stained samples Addition of beads Unstained samples CytoWin Cell parameters

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21 Vaulot and Marie, 1999 JGR Equatorial Pacific

22 Vaulot and Marie, 1999 JGR Equatorial Pacific

23 McycleSampling Fresh sampleFixation Freezing -80°C Thawing Stained samples Addition of beads CytoWin Cell parameters Unstained samples Cell cycle analysis

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25 Vaulot et al., 1995 Science

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28 Depth profile Almofront2 CTD512

29 DNA QUANTIFICATION OF PROCHLOROCOCCUS

30 In situ hybridization

31 Fred

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