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We had a brief introduction to Bioinformatics Learned about DNA › DNA sequencing ATGC or in RNA, the T becomes a ‘U’ Only some of the videos such as the diseases one was interesting to watch › Extracted Nucleic Acid from fruits I really liked how we had a hands on activity rather than just a video or a lecture
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DNA bracelet › We made bracelets using colored beads which represented the different letters(ATGC) in a sequence We also used the translation table to figure out what type of amino acid each sequence was Bio-Linux › How to install Bio-Linux on a computer I liked how we were taken step by step during this process › Basic Linux commands We got to experiment with Pico and Perl
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Bioinformatics software/websites › NCBI We used NCBI to search nucleotide sequences and analyze them › BLAST Can be used to find similarities between sequences › EMBOSS We used the different EMBOSS command line programs such as: seqret, entret, transeq, etc which was really helpful I liked how we got more practice with Bio-Linux since it by using
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Project Work › We obtained the target sequences of the organisms using seqret › Primers Designed primers by finding similar stretches of DNA (we used Jemboss applications to find it) We identified various organisms through the primers constructed
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