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Sea Urchin Vitelline Envelope Removal Devin Morris Maurice Fernandez Milton Diaz
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Question Do the two different methods used in VE removal (Alpha- Amylase & DTT) yield the same data in 10% and 12% gels, or does one yield more accurate results than the others?
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Removal of Vetelline Envelope Vitelline Envelope - Outer membrane of female egg that plays a role in fertilization α-Amylase - Enzymes used to break up starches Dithiothreitol - DTT - Reduces disulfide bonds in proteins and enzymes. Manual - Manually remove the Vitelline Envelope
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Gels Measured 10% Acrylamide gel Concentration 12% Acrylamide gel Concentration
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Lanes - Measured each band length - Adjusted brightness and contrast on lanes to make better measurements of bands 10% Manual12% Manual
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Linear
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Quadratic
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Cubic
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10% Linear Model
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10% Quadratic Model
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10% Cubic Model
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10% Non-Standard Model Y=ax^3+bx+c
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Linear
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Quadratic
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Cubic
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12% Linear Model
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12% Quadratic Model
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12% Cubic Model
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12% Non-Standard Model
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Conclusion - Based on our data analysis and calculations we concluded that the cubic model fits better for 10% and 12%.
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Alpha - amylise 10% Cubic vs Non-Satandard
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DTT 10% Non-standard vs Cubic
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10% Manual Non-standard vs Cubic
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Alpha - amylise 12% Cubic vs Non-standard
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DTT 12% Non-standard vs Cubic
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12% Manual Cubic vs Non-standard
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Conclusion - In addition the DTT process of removal of the Vitelline envelope is better than the α-Amylise process for both the Non-standard and cubic models in both 10% and 12% gels. Analysis of the confidence intervals produced by the cubic and non-standard models showed the non-standard model to work better for the 10% gel and the cubic to work better for the 12% gel.
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