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Biostatistics in biology
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Why we use biostatistics in biology
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Facts should be proven e.g. Chemical A is anticancer drug. How to prove it?
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Facts should be proven e.g. Chemical A is anticancer drug. How to prove it? Experimental design Experimental factors Control
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Experimental design Measure for a pre-tested parameters such as markers Use prop Test Analysis ……..etc.
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Experimental factors All experimental factors should be fixed except the drug E.g. Dose dependant Different extraction method of the drug Different administration of the drug Sample size of the experiment
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Sample size Number of replicates tested
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Control Positive control Negative control
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Where is the correct value? variable R1: 30 R2: 26 R3: 36 R4: 48 R5: 50 R6: 16 R7: 31 Mean(Ý) =33.85 n=7
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Statistical analysis
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Standard deviation Degree of freedom =n-1
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Biological data Aflatoxin in peanut ( Y) Y-Ý(Y-Ý) 2 303.8514.822 267.8561.622 36 48 50 16 31 Mean(Ý) =33.85 n=7 =
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Justify a genetic hypothesis using chi square test
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Chi square test X2 = Also called ANOVA or X 2 test for goodness of fit Is observed data consistent with hypothesized ones?
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Example for chi square test application in genetics In a cross between smooth and wrinkled pea seeds, you obtained 99 smooth seeds and 45 wrinkled seeds. Determine if the ratio 3:1 is consistent with this result.
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Problem 1 Justify 3:1 ratio
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Problem 2 Do you think the inheritance of the above genetic trait follows the ratio of 1:2:1
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Problem 2 answer justify the ratio 1:2:1 GenotypeobservedexpectedO-E AA159159.75-0.750.003 Aa321319.51.50.007 aa159159.75-0.750.003 Total6390.013
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Types of variables 1- Qualitative 2- Quantitative
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Arrange your data in a meaningful form 1- Data tabulation 2- Graph 3-Statistical analysis
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Use of molecular genetic in genotyping
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Genetic analysis Analysis of a certain genetic trait is very complicated. Researchers need to identify all genes responsible for phenotype determination as well as interacting genes. E.g. Cell shape genes and mutation induction methodology
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Mutation induction to study a genetic trait X-ray Insertional mutagenesis Chemical mutagenesis
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Complementation test in gene identification
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Results interpretation
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