1. Reactome

2. Information maintained by cross-referenced

3.  Reactome: Data base of reactions, pathways of human biology.  Simple search: protein name -> reactions,pathway. pathway -> reactions, proteins.  Tools: SkyPraint BioMart.  Advantage, disadvantage We will talk on:

4. Reactome-statistics

5. Reactome-HomePage contains five sections (from top to bottom):

6. Reactome-HomePage Containes five sections (from top to bottom):  The Navigator bar provides access to the rest of the Reactome web site:  The Search panel allows you to perform text-based searches on Reactome.

7. The Search panel

8. Results

9. Reactome-HomePage Containes five sections (from top to bottom):  The Navigator bar provides access to the rest of the Reactome web site:  The Search panel allows you to perform text-based searches on Reactome.  The Species chooser allows you to choose a species.

10. Species chooser

11. The reactions map

12. The reactions map and the topics list

13. The reactions map and topics list

14. Blue arrow: If the reaction is confirm by exp Pink arrow: if the reaction has not been confirmed directly but has been inferred manually from another reaction (either in the selected species or another species) Green arrow: if the reaction has been inferred computationally Grey arrow :Reactions that are not part of the selected Pathway Topic The reactions map and topics list

16. Results

19. Input Output Previous reaction Next reaction

20. Reactome-Tools Reactome-SkyPainter BioMart

21. Reactome-SkyPainter

23. Reactome-SkyPainter-Results

24. Reactome-BioMart

26. Reactome-BioMart-Results

27. Reactome-BioMart

28. In summary Pathways, reactions in human biology Graphic map BioMart Skypainter But: No description of the methods in the result pages