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土壤菌 Bacillus 之分離 與 木聚糖水解脢及纖維素水解脢活性分析 學 生:何季庭 指導教授:杜 鎮 研究員
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杜鎮 中研院植物所 425 室 學經歷:德國慕尼黑大學博士
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Introduction Xylanase, CMCase 廢料的處理 資源回收再利用 農業畜牧業的利用 Bacillus Cloning Technique
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Method—Sample preparation 土壤樣品的採取 Bacillus 分離 單株分離 Congo red assay 多糖類水解脢活性分析 Zymogram
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Congo Red Assay Xylan Congo red Acetate
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Zymogram Read protein size then calculate the gene size Supernatant, pellet
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Method—Cloning Technique Insert : Chromosome DNA extraction Partial digest ( Sau3AI ) Gel extraction ( 500bp-2kb ) Vector : Puc19 Digested by HindIII Alkaline phosphotase Gel extraction
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pUC19
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Partial Digestion
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Puc19 digested by HindIII
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Method—Cloning Technique Ligation Electroporesis
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Ligation
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Method—Clones Assay Ampicillin-IPTG-X-gal assay ( Blue-white assay ) Congo red assay Plasmid extraction, restriction enzyme check Zymogram
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Plasmid Assay Digested by PvyII, two cut sites on pUC19
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Method—Further experiment Subcloning Sequencing Protein purification Protein activity assay Commercial application Further research
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Result 32 xylanase active bacilli were isolated 28 CMCasa active bacilli were isolated No xylanase or CMCase active clone was detected
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Discussion Partial digest Ampicillin affects congo red assay Blue-white assay efficiency is not so reliable
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The reason of failure Immature operating!! Bacillus anthracis str. KrugerB, unfinished sequence Accession: NC_004126 Number of Contigs: 887 Total Bases Sequenced: 10 mbNC_004126 The gene we are seeking: 500-2000 bp Rate: get 1 positive clone in more than 10000 clones!!
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The End Thank you for your attention
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