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PCR Product Orientation Test T7 EcoRI Cloning Site EcoRI PmeI PstI SpeI NotI pCR4-TOPO T7.

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Presentation on theme: "PCR Product Orientation Test T7 EcoRI Cloning Site EcoRI PmeI PstI SpeI NotI pCR4-TOPO T7."— Presentation transcript:

1 PCR Product Orientation Test T7 EcoRI Cloning Site EcoRI PmeI PstI SpeI NotI pCR4-TOPO T7

2 PCR ProductT7 EcoRI PmeI PstI SpeI NotI T7 PCR ProductT7 EcoRI PmeI PstI SpeI NotI T7 Effective Orientation Ineffective Orientation

3 PCR ProductT7 EcoRI PmeI PstI SpeI NotI T7 PCR ProductT7 EcoRI PmeI PstI SpeI NotI T7 Effective Orientation Ineffective Orientation SpeI Digest SpeI Vector (~4000bp) + Small PCR Frag Digest SpeI Vector (~4000bp) + Larger PCR Frag

4 HT115 DE3 E. coli Strain –Null mutation of rnc null (RNaseIII) RNase III degrades double stranded RNA –DE3 – lambda lysogen containing IPTG inducible T7 RNA polymerase Lysogen contains tet resistance gene Timmons L, Court DL, Fire A (2003)

5 Transformation Wednesday –Add Tetracyline to LB broth –Inoculate with culture of HT115 DE3 –Grow O/N 37° Thursday AM –Prepare second flask of LB+tet –Inoculate with 500ml of overnight culture HT115DE3. –Grow ~4 hours Thursday PM –Treat Cells with CaCl to make competent –Mix cells with RNAi vector –Spread on LB + tet + amp plates –Grow O/N 37°


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