1. Bibliographic Resources Fredj Tekaia Institut Pasteur tekaia@pasteur.fr EMBO Bioinformatics and Comparative Genome Analyses Course Institut Pasteur Paris June 27 - July 9, 2011 EMBO Bioinformatics and Comparative Genome Analyses Course Institut Pasteur Paris June 27 - July 9, 2011

2. Bibliography is essential in research activities Researchers have to keep tract of the flow of scientific works that are regularly published Today this task is facilitated by the online availability of scientific journals.

3. Plan: Bibliographic resources: (paper & electronic journals) News groups related to Bioinformatics and Genome analyses

4. We will show links to some significant journals and sites in Bioinformatics and in Genome Research Activities.

5. A Science Primer http://www.ncbi.nlm.nih.gov/About/primer/

6. PubMed (@ncbi): http://www.ncbi.nlm.nih.gov/pubmed/ Abstracts and full papers. The easiest way is:

7. PubMed Central: A free archive of life sciences journals: http://www.ncbi.nlm.nih.gov/pmc/

8. Journals (paper & electronic forms) "Sign in" to receice regularly Table Of Contents (TOC)

9. http://www.nature.com/

10. http://www.nature.com/nature/current_issue.html Each Thursday

11. http://www.sciencemag.org/magazine Each Friday

12. nature Omics Gateway: http://www.nature.com/omics/subjects/index.html

13. http://www.nature.com/nrg/index.html

14. http://genome.cshlp.org/

15. NAR: http://nar.oxfordjournals.org/

16. http://bioinformatics.oxfordjournals.org/

17. Plos journals: Plos Biology: http://www.plosbiology.org/home.actionhttp://www.plosbiology.org/home.action Plos genetics: http://www.plosgenetics.org/home.actionhttp://www.plosgenetics.org/home.action Plos Computational Biology: http://www.ploscompbiol.org/home.actionhttp://www.ploscompbiol.org/home.action Ten simple Rules collection: http://www.ploscollections.org/article/browseIssue.action?issue=info%3Adoi%2F10.1371%2Fissue.pcol.v03.i01

18. http://www.ploscompbiol.org/home.action

19. Ten simple rules: http://www.ploscompbiol.org/

20. Some guiding papers on Bioinformatics: http://www.ploscompbiol.org/

21. http://www.biomedcentral.com/browse/journals/

22. http://genomebiology.com/

23. http://www.biomedcentral.com/bmcbioinformatics/

24. http://www.biomedcentral.com/bmcgenomics/

25. http://www.biomedcentral.com/bmcevolbiol/

26. Publishing your Research

27. http://www.sfedit.net/

29. Publishing your Research http://pubs.acs.org/page/publish-research/index.html

30. Publishing your Research: Writing papers http://pubs.acs.org/page/publish-research/episode-1.html

31. Scientific work evaluation

32. Scientific Work Evaluation: h-index Web of Sciences (ISI): http://en.wikipedia.org/wiki/ISI_Web_of_Knowledge Scopus: http://en.wikipedia.org/wiki/Scopus Google Scholar: http://code.google.com/p/citations-gadget/ Definition: h-index A scientist has index h if h of [his/her] N p papers have at least h citations each, and the other (N p − h) papers have at most h citations each. The h-index is an index that attempts to measure both the productivity and impact of the published work of a scientist.indexscientist

33. Scientific work Evaluation : h-index and citations ISI web knowledge: http://isiwebofknowledge.com/http://isiwebofknowledge.com/ Citation and journal database. Requires authentication and login.

34. Citations follow up of a publication. Try an example

35. Ranking Universities THE (Times High Education) World University Ranking: http://www.timeshighereducation.co.uk/world-university-rankings/2010-2011/top-200.html

36. Ranking Web of World Universities (spanish lab): http://www.webometrics.info/

37. Top 12000 Universities

38. http://www.topuniversities.com/

39. http://www.topuniversities.com

40. News Groups

41. net.bio.net Mailing Lists http://www.bio.net/biomail/listinfo/ Lists all the public mailing lists on net.bio.net.

42. http://www.bio.net/biomail/listinfo/ Lists all the public mailing lists on net.bio.net.

43. News Groups Bionews: http://www.bio.net/biomail/listinfo/bionews BIOSCI newsgroup BIONEWS / bionet.announce is for Announcements of widespread interest to biologists. (Moderated) To see the collection of prior postings to the list, visit the Bionews Archives: http://www.bio.net/bionet/mm/bionews/ Bionews Archives Subscribing to Bionews (to receive all e-mails sent to this news group) To post a message to all the list members, send email to bionews@net.bio.net bionews@net.bio.net

44. News Groups Bionews:

45. PhD Positions

46. PhDs.org http://www.phds.org/

47. Google