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Enzyme Nomanclature.

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Presentation on theme: "Enzyme Nomanclature."— Presentation transcript:

1 Enzyme Nomanclature

2 CP and ATP Use During Exercise
Myokinase reaction 2 ADP ATP + AMP

3 - H - C - H - C - C - C - C - C = O - C - C = O - C - C = O O = C = O
methyl H - C - H OH - alcohol C - C - C H - aldehyde C - C = O C - keto C - C = O Carbon dioxide OH - carboxylic acid O = C = O C - C = O

4 Glycolysis

5 Glycolysis -conversion of glucose to pyruvate, ATP & NADH + H+
ADP ATP O O Glucose Glucose-6-P (C6H12O6) - IRREVERSIBLE (kinase reaction)--Glucokinase in liver, Hexokinase in skeletal muscle - takes 1 ATP - now locked in cell because phosphorylated compounds can’t cross cell membranes by diffusion and are not recognized by GLUT transporters - Keeps intracellular free glucose levels very low to maintain facilitated diffusion gradient

6 Glycolysis (cont.) Step 2: C P P C C O O Glucose-6-P Fructose-6-P
G-6-P Isomerase Glucose-6-P Fructose-6-P Isomerization (rearrangement of bonds) -(ie Aldose Ketose) -frees the #1-C to be phosphorylated

7 (Phosphofructokinase (PFK)-1)
Glycolysis (cont.) Step 3: ATP ADP P C C P C C P O O (Phosphofructokinase (PFK)-1) Fructose-6-P Fructose-1,6-Bisphosphate Irreversible (kinase reaction) - takes 1 ATP (-2 so far) - phosphorylates fructose at 1-C

8 Glycolysis (cont.) Step 4: H O H H C H C O P H C O P H C OH C O + C O
(aldolase) H H C OH H H C OH DHAP G-3-P H C O P DHAP= dihydroxyacetone phosphate (3-C) G-3-P= Glyceraldehyde 3 phosphate (3-C) H F-1,6 BP (6-C)

9 Glycolysis (cont.) Step 5: C O P C O P H C OH C O Triose - P Isomerase
DHAP G-3-P Isomerization - rearrangement of Bonds - Ketose Aldehyde - 1 G-6-P G-3-P

10 Glycolysis (cont.) Step 6: No Energy has been gained YET! -2 ATP H O O
NAD+ NADH + H+ C C C OH C OH Pi C O P C O P G-3-P 1, 3, D.P.G -Phosphoglyceraldehyde dehydrogenase -NAD+ reduced -Aldehyde C oxidized to carboxylic acid

11 (Phosphoglycerate kinase)
Glycolysis (cont.) Step 7: O O P O O- ADP ATP C C (2x) C OH (Phosphoglycerate kinase) C OH C O P C O P 1, 3, DPG 3 Phosphoglycerate *1, 3 DPG has a G of (ATP = -7.3) Substrate level phosphorylation

12 (Phosphoglycerate mutase)
Glycolysis (cont.) Step 8: O O- O O- C C C OH (Phosphoglycerate mutase) C O P C O P C OH 3 Phosphoglycerate 2 Phosphoglycerate *mutase - transfers a phosphate group

13 Phosphoenol pyruvate (PEP)
Glycolysis (cont.) Step 9: O- O O O- C +H20 C (Enolase) C O P C O P C OH C 2 Phosphoglycerate Phosphoenol pyruvate (PEP) This is a dehydration step. WHY? G of PEP =

14 Generate 2 ATP via substrate level phosphorylation
Glycolysis (cont.) Step 10: O O- O O- C +H20 C ADP ATP C O P C O (Pyruvate kinase) C CH3 Pyruvate PEP Generate 2 ATP via substrate level phosphorylation

15 (Lactate Dehydrogenase)
Glycolysis (cont.) step 6 Step 11: O O- O O- C C NADH + H NAD C O H C O H (Lactate Dehydrogenase) CH3 CH3 Lactate Pyruvate NADH + H oxidized to NAD pyruvate reduced to lactate

16 LDH Isozymes LDH-H has a high Km for pyruvate (lactate to pyruvate)
LDH-M has a low Km for pyruvate (pyruvate to lactate)

17 Glycolysis - Summary Step 1: ATP Step 3: ATP Step 6: NADH + H + Step 7: ATP phoshoglyceraldehyde kinase Step 10: + 2 ATP pyruvate kinase NET + 2 ATP via substrate-level phosphorylation Key regulated enzymes: PFK and HK

18 Glycolysis - Summary (cont.)
Key enzyme: PFK (step 3) -allosterically regulated Activated by: - AMP, ADP, PI Inactivated by: - ATP - Citrate - H+

19 CP and ATP Use During Exercise
Myokinase reaction 2 ADP ATP + AMP

20 Glycolytic Flux with Graded Exercise
Over rest: x x x x Over 35% VO2 max x x x

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23 Cell to Cell Lactate Shuttle

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27 Immunolabeling of LDH using antibodies conjugated with 15nm gold particles

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29 Monocarboxylic transporter MCT 1-8 mMCT pmMCT

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32 Localization of Krebs Cycle:
Glycolysis occurs in the cytosol of cells. Pyruvate transported into the mitochondrion to be metabolized further. Mitochondrial Compartments: The matrix contains Pyruvate Dehydrogenase, enzymes of Krebs Cycle, and other pathways, e.g., fatty acid oxidation & amino acid metabolism.

33 Mitochondrial compartments
Inner membrane infoldings, called cristae, contain constituents of the respiratory chain & ATP Synthase. The inner membrane is the major permeability barrier. It contains various transport catalysts, including a carrier protein that allows pyruvate to enter the matrix.

34 Pyruvate Dehydrogenase, catalyzes oxidative decarboxylation of pyruvate, to form acetyl-CoA.

35 Pyruvate Dehydrogenase is a large complex, with multiple copies of each of 3 enzymes:
E1, E2 & E3.

36 View an animation of the Pyruvate Dehydrogenase reaction sequence.
Acetyl CoA, a product of the Pyruvate Dehydrogenase reaction, is a central compound in metabolism.

37 Activation of PDH with Graded Exercise

38 Regulation of PDH during exercise
*

39

40 % of CHO from: Glycogen % % % % Blood glucose % % % %

41 % of pyruvate into: CAC % % % % HLA % % % %

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43 PDH activation with Graded Exercise


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