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Viewpoint Plotting Program for Linkage Results Harry Beeby & Sarah Medland Queensland Institute of Medical Research.

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Presentation on theme: "Viewpoint Plotting Program for Linkage Results Harry Beeby & Sarah Medland Queensland Institute of Medical Research."— Presentation transcript:

1 Viewpoint Plotting Program for Linkage Results Harry Beeby & Sarah Medland Queensland Institute of Medical Research

2 A quick and easy way to view linkage results Two main types of plots Univariate Multivariate-Univariate comparison  Can view all chromosomes at once or one at a time

3 Univariate Plots Unlimited number of traits Easy to customise  colours, line style, grid and reference lines

4 Multivariate Plots Compare univariate and multivariate results Display path coefficients in ‘pop up’ windows

5 Input format Tab delimited Univariate Plot Chromosome, Map distance, Marker name, LOD scores/Chi-squares Multivariate Plot Chromosome, Map distance, Marker name, Univariate LOD score, Multivariate LOD score, Path coefficients (maximum of 10)

6 To plot  Go to: File/open file  Select file  Specify Univariate or Multivariate Customise using the Edit menu  Change axis tiles/ colours/ font size  Change line style/ width/ colour Results can be printed or saved as jpg


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