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1 Tree-Structured Indexes Chapter 10
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2 Introduction As for any index, 3 alternatives for data entries k* : Data record with key value k Choice is orthogonal to the indexing technique used to locate data entries k* : Hash Tree
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3 Introduction Tree-structured indexing techniques support both range searches and equality searches.
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4 Motivation for Tree Index Range search : `` Find all students with gpa > 3.0 ’’ Given Sorted file USE: do binary search to find first such student, then scan to find others. Cost of binary search can be quite high.
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5 Motivation for Tree Index Range search : `` Find all students with gpa > 3.0 ’’ Simple idea: Create an `index’ file. * Can do binary search on (smaller) index file! Page 1 Page 2 Page N Page 3 Data File k2 kN k1 Index File
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6 Motivation for Tree Index Range search : `` Find all students with gpa > 3.0 ’’ Sorted file, do binary search to find first such student, then scan to find others. Cost of binary search can be quite high. Simple idea: Create an `index’ file. * Can do binary search on (smaller) index file! Page 1 Page 2 Page N Page 3 Data File k2 kN k1 Index File
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7 Alternative Tree Index Structures ISAM (Indexed Sequential Access Method) : static structure. B+ tree : dynamic structure. Adjust gracefully under inserts and deletes.
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8 ISAM Index Page 1 Page 2 Page N Page 3 Data File k2 kN k1 Index File P 0 K 1 P 1 K 2 P 2 K m P m index entry
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9 ISAM Index file may still be quite large. But we can apply the idea repeatedly! * Only leaf pages contain data entries. Non-leaf Pages Overflow page Primary pages Leaf
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10 Example ISAM Tree Each node can hold 2 entries. No need for `next-leaf-page’ pointers. (?) 10*15*20*27*33*37*40* 46* 51* 55* 63* 97* 20335163 40 Root
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11 Inserting 23*, 48*, 41*, 42*... 10*15*20*27*33*37*40* 46* 51* 55* 63* 97* 20335163 40 Root
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12 After Inserting 23*, 48*, 41*... 10*15*20*27*33*37*40* 46* 51* 55* 63* 97* 20335163 40 Root 23* 48* 41* Overflow Pages Leaf Index Pages Primary
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13 After Inserting 23*, 48*, 41*, 42*... 10*15*20*27*33*37*40* 46* 51* 55* 63* 97* 20335163 40 Root 23* 48* 41* 42* Overflow Pages Leaf Index Pages Primary
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14 Now Let’s Delete: 42*, 51*, 97*, … 10*15*20*27*33*37*40* 46* 51* 55* 63* 97* 20335163 40 Root 23* 48* 41* 42* Overflow Pages Leaf Index Pages Primary
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15... After Deleting 42*, 51*, 97* * Note that 51* appears in index levels, but not in leaf! * Index still is “fully balanced”, but with many empty slots. 10*15*20*27*33*37*40* 46*55* 63* 20335163 40 Root 23* 48* 41*
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16 Comments on ISAM Data Pages Index Pages Overflow pages
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17 Comments on ISAM File creation : Leaf (data) pages allocated sequentially sorted by search key index pages allocated space for overflow pages later created Index entries : ; they `direct’ search for data entries, which are in leaf pages or even in overflow pages. Data Pages Index Pages Overflow pages
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18 Comments on ISAM Search : Start at root; use key comparisons to go to leaf. Cost log F N ; F = # entries/index pg, N = # leaf pgs Insert : Find leaf that data entry belongs to, and put it there. Delete : Find and remove from leaf; if empty overflow page, de-allocate. If empty primary page, leave it. Data Pages Index Pages Overflow pages
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19 Comments on ISAM : Pros? Cons? Static tree structure : inserts/deletes affect only leaf pages. - Long overflow chains may appear. - May affect retrieve performance. Keep 20% free in leaf page. Problem might still appear! + Concurrent access. index page is not locked since it is never changed. ? What to do instead ????
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20 B+ Tree: Most Widely Used Index Guarantee Search/Insert/delete at log F N cost with F = fanout, N = # leaf pages Keep tree height-balanced. Supports equality and range-searches efficiently. Index Entries Data Entries ("Sequence set") (Direct search)
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21 Example B+ Tree Search begins at root, and key comparisons direct it to a leaf (as in ISAM). Search for 5*; 15*, for all data entries >= 24*. * leaf nodes form a sequence to answer range query Root 1724 30 2* 3*5* 7*14*16* 19*20*22*24*27* 29*33*34* 38* 39* 13
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22 B+ Tree Concepts Insert/delete at log F N cost; keep tree height- balanced. Each node contains d <= m <= 2 d entries. The parameter d is called order of tree. Minimum 50% occupancy or fill-factor (except for root). Index Entries Data Entries ("Sequence set") (Direct search)
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23 B+ Trees in Practice Typical order: 100. Typical fill-factor: 67%. average fanout = 133 Typical capacities: Height 4: 133 4 = 312,900,700 records Height 3: 133 3 = 2,352,637 records Can often hold top levels in buffer pool: Level 1 = 1 page = 8 Kbytes Level 2 = 133 pages = 1 Mbyte Level 3 = 133 2 = 17,689 pages = 133 MBytes
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24 Inserting Data Entry into B+ Tree Find correct leaf L. Put data entry onto L. If L has enough space, done ! Else, must split L (into L and a new node L2) Redistribute entries evenly, copy up middle key. Insert index entry pointing to L2 into parent of L. This can happen recursively To split index node, redistribute entries evenly, and push up middle key. (Contrast with leaf splits.)
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25 Inserting Data Entry into B+ Tree Splits “grow” the tree in width. A root split increases height of tree. Tree growth: gets wider or one level taller at top.
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26 Root 1724 30 2* 3*5* 7*14*16* 19*20*22*24*27* 29*33*34* 38* 39* 13 Inserting 8* into Example B+ Tree
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27 Root 1724 30 2* 3*5* 7*14*16* 19*20*22*24*27* 29*33*34* 38* 39* 13 Inserting 8* into Example B+ Tree 2* 3*5* 7* 8* 5 (Note that 5 is continues to appear in the leaf.) s copied up and
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28 Root 1724 30 2* 3*5* 7*14*16* 19*20*22*24*27* 29*33*34* 38* 39* 13 Inserting 8* into Example B+ Tree 2* 3*5* 7* 8* 5 52430 17 13 Entry to be inserted in parent node. (Note that 17 is pushed up and only once Appears in the index.)
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29 Inserting 8* into Example B+ Tree Observe how minimum occupancy is guaranteed in both leaf and index pg splits. Note difference between copy- up and push-up ; be sure you understand the reasons for this. 2* 3*5* 7* 8* 5 Entry to be inserted in parent node. (Note that 5 is continues to appear in the leaf.) s copied up and appears once in the index. Contrast 52430 17 13 Entry to be inserted in parent node. (Note that 17 is pushed up and only this with a leaf split.)
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30 Inserting 8* into Example B+ Tree Observe how minimum occupancy is guaranteed in both leaf and index pg splits. Note difference between copy- up and push-up ; be sure you understand the reasons for this. 2* 3*5* 7* 8* 5 Entry to be inserted in parent node. (Note that 5 is continues to appear in the leaf.) s copied up and appears once in the index. Contrast 52430 17 13 Entry to be inserted in parent node. (Note that 17 is pushed up and only this with a leaf split.)
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31 Example B+ Tree After Inserting 8* Notice that root was split, leading to increase in height. 2*3* Root 17 24 30 14*16* 19*20*22*24*27* 29*33*34* 38* 39* 135 7*5*8*
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32 Example B+ Tree After Inserting 8* In this example, we could avoid split by re-distributing entries; however, this is usually not done in practice. 2*3* Root 17 24 30 14*16* 19*20*22*24*27* 29*33*34* 38* 39* 135 7*5*8*
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33 Root 1724 30 2* 3*5* 7*14*16* 19*20*22*24*27* 29*33*34* 38* 39* 13 Inserting 8* into Example B+ Tree using Redistribution Avoid split by re-distributing entries : -Checking sibling to decide whether redistribution is possible. -Usually redistribution in leaf, not in non leaf nodes.
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34 Example B+ Tree After Inserting 8* using Redistribution Root 1724 30 2* 3*5* 7*14* 16* 19*20*22*24*27* 29*33*34* 38* 39* 8 8*
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35 Deleting a Data Entry from a B+ Tree Start at root, find leaf L where entry belongs. Remove the entry. If L is at least half-full, done! If L has only d-1 entries, Try to re-distribute, borrowing from sibling (adjacent node with same parent as L). If re-distribution fails, merge L and sibling. If merge occurred, must delete entry (pointing to L or sibling) from parent of L. Merge could propagate to root, decreasing height.
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36 Now Try to Delete 19* and then 20* 2*3* Root 17 24 30 14*16* 19*20*22*24*27* 29*33*34* 38* 39* 135 7*5*8*
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37 Now Try to Delete 19* … 2*3* Root 17 24 30 14*16* 19*20*22*24*27* 29*33*34* 38* 39* 135 7*5*8* Deleting 19* is easy.
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38 Now Delete 20* … 2*3* Root 17 24 30 14*16* 20*22* 24*27* 29*33*34* 38* 39* 135 7*5*8*
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39 Now Delete 20* … 2*3* Root 17 24 30 14*16* 20*22* 24*27* 29*33*34* 38* 39* 135 7*5*8* Deleting 20* can be done with re-distribution.
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40 We have deleted 20*... Deleting 20* done with re-distribution. Notice how middle key is copied up. 2*3* Root 17 30 14*16* 33*34* 38* 39* 135 7*5*8*22*24* 27 27*29*
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41 Now Deleting 24*... Can re-distribution among sibling work again? 2*3* Root 17 30 14*16* 33*34* 38* 39* 135 7*5*8*22*24* 27 27*29*
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42 Now Deleting 24*... ? If not, so let’s try merging of siblings … 2*3* Root 17 30 14*16* 33*34* 38* 39* 135 7*5*8*22*24* 27 27*29*
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43 Now Deleting 24* via Merging. 2*3* Root 17 30 14*16* 33*34* 38* 39* 135 7*5*8*22* 27 27*29* Who link to who ? 22*27* 29*
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44 Now Deleting 24* via Merging. 2*3* Root 17 30 14*16* 33*34* 38* 39* 135 7*5*8*22*24* 27 27*29* Observe ` toss ’ of index entry (on right) 30 22*27* 29*33*34* 38* 39*
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45 Now Deleting 24* via Merging. 2*3* Root 17 14*16* 135 7*5*8* 30 22*27* 29*33*34* 38* 39* Are we done ?
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46 Now Deleting 24* via Merging. 2*3* Root 17 14*16* 135 7*5*8* 30 22*27* 29*33*34* 38* 39* First try re-distributing If not possible, try merging.
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47 Now Deleting 24* via Merging. 2*3* Root 17 14*16* 135 7*5*8* 30 22*27* 29*33*34* 38* 39* Observe ` pull down ’ of index entry. 2* 3* 7* 14*16* 22* 27* 29* 33*34* 38* 39* 5*8* Root 30 135 17
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48... And Then Deleting 24* Must merge. Observe ` toss ’ of index entry (on right), and ` pull down ’ of index entry (below). 30 22*27* 29*33*34* 38* 39* 2* 3* 7* 14*16* 22* 27* 29* 33*34* 38* 39* 5*8* Root 30 135 17
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49 Example of Non-leaf Re-distribution Tree is shown below during deletion of 24*. In contrast to previous example, can re-distribute entry from left child of root to right child. Root 135 1720 22 30 14*16* 17*18* 20*33*34* 38* 39* 22*27*29*21* 7*5*8* 3*2*
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50 Example of Non-leaf Re-distribution Tree is shown below during deletion of 24*. Root 135 17 2020 2 30 14*16* 17*18* 20*33*34* 38* 39* 22*27*29*21* 7*5*8* 3*2*
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51 Miscellaneous about B-Trees
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52 Duplicate keys in B+ Tree Alternative 1: overflow page Alternative 2: contain duplicates in leaf page and fetch using leaf sequence pointer not efficient in delete! (check duplicate entries) Solution:, use rid as part of searching key. Index includes both key and rid fields. Alternative 3:, similar with 2.
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53 Prefix Key Compression Important to increase fan-out. Key values in index entries only `direct traffic’; can often compress them. Insert/delete must be suitably modified.
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54 Prefix Key Compression of Key Values Adjacent index entries with search key values: Dannon Yogurt, David Smith and Devarakonda Murthy, We can abbreviate David Smith to Dav. Is this correct? Not quite! What if there is a data entry Davey Jones ? So can only compress David Smith to Davi In general, while compressing, leave each index entry greater than every key value (in any subtree) to its left.
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55 Loading of a B+ Tree If we have a large collection of records, and want to create a B+ tree on some field, how do we load these records into index?
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56 Bulk Loading of a B+ Tree Repeatedly inserting records is very slow. Bulk Loading can be done more efficiently. Step 1: Initialization : Sort all data entries, Insert pointer to first (leaf) page in a new (root) page. 3* 4* 6*9*10*11*12*13* 20*22* 23*31* 35* 36*38*41*44* Sorted pages of data entries; not yet in B+ tree Root
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57 Bulk Loading (Contd.) Index entries for leaf pages always entered into right-most index page just above leaf level. When this fills up, it splits. Split may go up right-most path to the root. 3* 4* 6*9*10*11*12*13* 20*22* 23*31* 35* 36*38*41*44* Root Data entry pages not yet in B+ tree 3523126 1020 3* 4* 6*9*10*11*12*13* 20*22* 23*31* 35* 36*38*41*44* 6 Root 10 12 23 20 35 38 not yet in B+ tree Data entry pages
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58 Summary of Bulk Loading Option 1: multiple inserts. Slow. Does not give sequential storage of leaves. Option 2: Bulk Loading Has advantages for concurrency control. Fewer I/Os during build. Leaves will be stored sequentially (and linked) Can control “fill factor” on pages.
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59 A Note on `Order’ Order ( d ) concept replaced by physical space criterion in practice (` at least half-full ’). Idea: Merge when more than half of space in node is unused. Why? Index pages can typically hold many more entries than leaf pages. Variable sized records and search keys mean different nodes will contain different numbers of entries. Even with fixed length fields, multiple records with the same search key value ( duplicates ) can lead to variable-sized data entries (if we use Alternative (3)).
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60 Summary Tree-structured indexes are ideal for range- searches, also good for equality searches. ISAM is a static structure. Only leaf pages modified; overflow pages needed. Overflow chains can degrade performance unless size of data set and data distribution stay constant. B+ tree is a dynamic structure. Inserts/deletes leave tree height-balanced; log F N cost. High fanout ( F ) means depth rarely more than 3 or 4. Almost always better than maintaining a sorted file.
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61 Summary (Contd.) B+ Tree : Typically, 67% occupancy on average. Usually preferable to ISAM, modulo locking considerations Adjusts to growth gracefully. Key compression increases fanout and reduces height. Bulk loading of B+ tree faster than repeated inserts Most widely used index in database management systems because of its versatility => One of the most optimized components of a DBMS.
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