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Shape resonances localization and analysis by means of the Single Center Expansion e-molecule scattering theory Andrea Grandi and N.Sanna and F.A.Gianturco a.grandi@caspur.it Caspur Supercomputing Center and University of Rome ”La Sapienza” URLS node of the EPIC Network
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Introduction The talk will be organized as follows: Introduction to the e-molecule scattering theory based on the S.C.E. approach SCELib(API)-VOLLOC code Shape resonances analysis Examples and possible applications Conclusions and future perspectives
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The Single Center Expansion method Central field model : Factorization of the wave-function in radial and angular components Bound and continuum electronic states of atoms Extension to bound molecular systems Electron molecule dynamics, molecular dynamics, surface science, biomodelling The SCE method
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The Single Center Expansion method In the S.C.E. method we have a representation of the physical world based on a single point of reference so that any quantity involved can be written as The SCE method
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In the SCE method the bound state wavefunction of the target molecule is written as
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The SCE method Symmetry adapted generalized harmonics Symmetry adapted real spherical harmonics
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The SCE method Where S stays for
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The bound orbitals are computed in a multicentre description using GTO basis functions of near-HF- limit quality - gk(a,rk) The SCE method Where N is the normalization coefficient
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The quadrature is carried out using Gauss- Legendre abscissas and weights for and Gauss- Chebyshev abscissas and weights for , over a dicrete variable radial grid The radial coefficients are computed by integration The SCE method
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Once evaluated the radial coefficients each bound one-electron M.O. is expanded as: So the one-electron density for a closed shell may be expressed as
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The SCE method and so we have the electron density as: then, from all of the relevant quantities are computed. Where
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The SCE method The Static Potential And as usual:
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The SCE method Where :
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The SCE method The polarization potential: where r c is the cut-off radius Short range interaction Long range interaction For r ≤ r c For r > r c
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Short-range first model: Free-Electron Gas Correlation Potential with and =0.1423, 1 =1.0529, 2 =0.3334. The SCE method
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Short-range second model: Ab-Initio Density Functional (DFT) Correlation Potential where is the Correlation Energy The SCE method
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Short-range second model: Ab-Initio Density Functional (DFT) Correlation Potential
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We need to evaluate the first and second derivative of (r) In a general case we have: The SCE method
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We need to evaluate the first and second derivative of (r) In a general case we have: The SCE method
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Problems with the radial part: The SCE method Single center expansion of F,F’, and F” are time consuming We performe a cubic spline of F to simplify the evaluation of the first and second derivative Problems with the angular part: For large values of the angular momentum L it is possible to reach the limit of the double precision floating point arithmetic To overcame this problem it is possible to use a quadrupole precision floating point arithmetic (64 bits computers)
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The SCE method Long-range : The asymptotic polarization potential The polarization model potential is then corrected to take into account the long range behaviour
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The SCE method Long-range : The asymptotic polarization potential In the simple case of dipole-polarizability
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The SCE method Long-range : The asymptotic polarization potential Where Usually in the case of a linear molecule one has
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The SCE method Long-range : The asymptotic polarization potential Where
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The SCE method Long-range : The asymptotic polarization potential In a more general case Once evaluated the long range polarization potential we generate a matching function to link the short / long range part of V pol
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The exchange potential: first model The Free Electron Gas Exchange (FEGE) Potential The SCE method Two great approximations: Molecular electrons are treated as in a free electron gas, with a charge density determined by the ground electronic state The impinging projectile is considered a plane wave
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The SCE method The exchange potential: first model The Free Electron Gas Exchange (FEGE) Potential
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The SCE method The exchange potential: second model The SemiClassical Exchange (SCE) Potential and modified SCE (MSCE) SCE: The local momentum of bound electrons can be disregarded with respect to that of the impinging projectile (good at high energy collisions)
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The SCE method The exchange potential: second model The SemiClassical Exchange (SCE) Potential and modified SCE (MSCE) MSCE: The local velocity of continuum particles is modified by both the static potential and the local velocity of the bound electrons.
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The solution of the SCE coupled radial equations Once the potentials are computed, one has to solve the integro-differential equation The SCE method
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The solution of the SCE coupled radial equations The quantum scattering equation single center expanded generate a set of coupling integro-differential equation
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The SCE method The solution of the SCE coupled radial equations Where the potential coupling elements are given as:
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The SCE method The solution of the SCE coupled radial equations The standard Green’s function technique allows us to rewrite the previous differential equations in an integral form: This equation is recognised as Volterra-type equation
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The SCE method The solution of the SCE coupled radial equations In terms of the S matrix one has: i,j identify the angular channel lh,l’h’
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SCELib(API)-VOLLOC code
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SCELIB-VOLLOC code
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Serial / Parallel ( open MP / MPI )
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SCELIB-VOLLOC code Typical running time depends on: Hardware / O.S. chosen Number of G.T.O. functions Radial / Angular grid size Number of atoms / electrons Maximum L value
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SCELIB-VOLLOC code Test cases:
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SCELIB-VOLLOC code Hardware tested:
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Shape resonance analysis
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we fit the eigenphases sum with the Briet-Wigner formula and evaluate and
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Uracil Uracil
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Uracil J.Chem.Phys., Vol.114, No.13, 2001
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Uracil E R =9.07 eV R =0.38 eV =0.1257*10 -15 s
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Uracil
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Uracil
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Uracil
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Uracil
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Thymine J.Phys.Chem. A, Vol. 102, No.31, 1998
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Thymine Exp 1 0.29 1.71 4.05 J.Phys.Chem. A, Vol. 102, No.31, 1998 (E.T.S.)
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Work in progress on Thymine Exp 2 8.57 J.Phys.Chem. Vol. 114, No.13, 2001
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Work in progress on ThymineExp30.04 0.74 1.03 1.25 1.48 1.75 5.5 6.7 7.8 Chem.Phys.Lett Vol. 377, (2003) 74-80 (crossed beams)
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Work in progress on ThymineExp44.85 6.2 7.4 8.8 14.8 19.4 Nature 231, 262, (1971) (E.E.L.)
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Cubane Cubane
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E r =9.24 eV =3.7 eV =1.8*10 -16 s
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Cubane Cubane
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E r =14.35 eV =4.2 eV =1.5*10 -16 s
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Cubane Cubane
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Conclusion and future perspectives Shape resonance analysis (S-matrix poles) Transient Negative Ion Orbitals analysis (post- SCF multi-det w/f) Dissociative Attachment with charge migration seen through bond stretching ( (R) (R) ) Study of the other DNA bases (thymine t.b.p., A,C,G planned) Development of new codes (SCELib-API & parallel VOLLOC)
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