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Bottom line on databanks
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Relational vs flat-file
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data tables SQL SQL can be used to connect/join and search tables Example: GI numbers -> sequence and GI numbers to taxonomic information
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data warehouse
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Inteins Protein Introns Found in Bacteria, Phage, Eukaryotes and Archaea Many contain homing endonucleases DNA RNA Protein Extein Intein + Host Protein Splicing and Homing Endo- nuclease Domains
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Small and large Inteins
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Large Intein with DNA
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Retained as Functional Endonuclease Homing Cycle Degeneration Acquisition of New Function Precise Loss Intein/Intron without or with Dysfunctional Homing Endonuclease Intein/Intron with Functional Homing Endonuclease Intein/Intron with HE from another Gene, Species, Population, or Subpopulation. Transfer of Homing Endonuclease and Invasion of Local Population Empty Target Site
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