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Tim Clark Harvard Medical School & Massachusetts General Hospital September 14, 2011 Copyright 2011 Massachusetts General Hospital. All rights reserved. Recoupling Data & Information in Bioscience
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2 “... a cubic millimeter chunk of the brain would comprise about 1 petabyte of data (at a 5- nanometer resolution)...” —McFedries, P (2011) The Coming Data Deluge. IEEE Spectrum Feb 2011 Data Deluge?or Publications Deluge?
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…[we] parked our egos and intellectual-property noses outside the door and agreed that all of our data would be public immediately.” John Trojanowski, MD, PhD U Penn Medical School Sharing of Data Leads to Progress on Alzheimer’s, NY Times, 12 Aug 2010 *[rare event] Trojanowski: “It was unbelieveable,...*
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A little history printing c. 1450 Scientifi c Journal 1665 GPO 1660 IBM S/360 InternetWeb 19641980s1991 print culture Web culture =
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A table of data from Philos Trans R Soc Lond 1(4):56
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“virtual witnessing”c.1665 Social Studies of Science, Vol. 14, No. 4. (Nov., 1984), pp. 481-520.
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“virtual witnessing” c. 2011
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CAUTION: contains rhetoric - do not remove* *actual data may not be included
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Core Pattern argument, claim, terminology, evidence
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swande:Claim Intramembranous Aβ behaves as chaperones of other membrane proteins G1 G5 rdf:type dct:title pav:contributedBy swanrel:referencesAsSupportiveEvidence G6 Ciccarese-Groth Nanopublications Model
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Deposit results data in a persistent store Data should be independently citable Assign unique data repository identifier Data should be contextualized in publication Core metadata available Metadata compatible with bio-ontologies Re-coupling data and information
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