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Linear Algebra, Principal Component Analysis and their Chemometrics Applications
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Linear algebra is the language of chemometrics. One can not expect to truly understand most chemometric techniques without a basic understanding of linear algebra Linear Algebra
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Vector A vector is a mathematical quantity that is completely described by its magnitude and direction x1x1 y1y1 x y P
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Vector A vector is a mathematical quantity that is completely described by its magnitude and direction x1x1 y1y1 x y P P = x1x1 y1y1
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MATLAB Notation
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Length of a Vector x1x1 y1y1 x y P P = x 1 2 + y 1 2 x = [x 1, x 2, …, x n ] x M = ( x i 2 ) 0.5 i=1 n Normal Vector u = x x u =1
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Normalized vector
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Mean Centered Vector x1x1 x2x2 xnxn … x = mx = M xixi i=1 n n mcx = x 1 - mx … x 2 - mx x n - mx 0 0 1 5 1 0 0 x = mx = 1 0 4 0 mcx = 0+2 1+2 5+2 1+2 0+2 y = 2 2 3 7 3 2 2 = mx = 3
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Mean centered
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? The length of a mean centered vector is proportional to the standard deviation of its elements y1y1 y2y2 ynyn … y =y* = y 1 - m y … y 2 - m y y n - m y y* ≈ s y i
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A set of p vectors [x 1, x 2, …, x p ] with same dimension n is linearly independent if the expression: c i x i = 0 M i=1 p holds only when all p coefficients c i are zero Linear Independent Vectors x1x1 x2x2 x3x3 c1x1c1x1 c2x2c2x2
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A vector space spanned by a set of p linearly independent vectors (x 1, x 2, …, x p ) with the same dimension n is the set of all vectors that are linear combinations of the p vectors that span the space Vector Space Basis set A set of n vectors of dimension n which are linearly independent is called a basis of an n-dimensional vector space. There can be several bases of the same vector space A coordinate space can be thought of as being constructed from n basis vectors of unit length which originate from a common point and which are mutually perpendicular Coordinate Space
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Q = P = x 1 y 1 x 1 y 1 x y P x1x1 y1y1 Q Vector Multiplication by a Scalar
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x = 1.19 y = 2.38 x y y = 2 x
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Addition of Vectors x1x1 x2x2 xnxn … y1y1 y2y2 ynyn … x + y = + = x 1 + y 1 … x 2 + y 2 x n + y n x + y x1x1 x2x2 y1y1 y2y2 y x x 1 + y 1 x 2 + y 2
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x1 c x … a x + a y = + = x2 c x xn c x y1 c y … y2 c y yn c y x1 c x + y1 c y … x2 c x + y2 c y xn c x + yn c y Component 1Component 2mixture axax ayay a x + a y
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Subtraction of Vectors x1x1 x2x2 xnxn … y1y1 y2y2 ynyn … x - y = - = x 1 - y 1 … x 2 - y 2 x n - y n x - y x1x1 x2x2 y1y1 y2y2 y x
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Inner Product (Dot Product) x1x1 x2x2 xnxn … x. x = x T x =[x 1 x 2 … x n ]= x 1 2 + x 2 2 + … +x n 2 = x 2 x. y = x T y = x y cos The cosine of the angle of two vectors is equal to the dot product between the normalized vectors: x. y x y cos =
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y x x. y = x y y x x. y = - x y y x x. y = 0 Two vectors x and y are orthogonal when their scalar product is zero x. y = 0and xy = 1= Two vectors x and y are orthonormal
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