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ENZYMES
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Outline Review – What is an enzyme? Models of enzyme activity
Lock and key Induced fit model Factors affecting enzyme activity Temperature pH Regulation of enzyme activity Inhibition Allosterically Feedback inhibition
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“Biological catalysts”: Speed up reactions in the body
What is an enzyme? “Biological catalysts”: Speed up reactions in the body
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What is a catalyst???? a substance which increase in the rate of a chemical reaction due to it’s participation. The effect of a catalyst may vary due to the presence of other substances known as inhibitors or poisons (which reduce the catalytic activity) Promoters (which increase the activity). The opposite of a catalyst, a substance that reduces the rate of a reaction, is an inhibitor.
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The antonym… The opposite of a catalyst, a substance that reduces the rate of a reaction, is an inhibitor.
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Literacy T.Y.P minutes. List three synonyms and three antonyms of a catalyst. Give an example of each. Share with your peers.
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Often globular (spherical) in shape
Type of protein Polymer of amino acids Often globular (spherical) in shape Contain “active sites” – depressions or grooves on the surface where molecules can bind
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Binding to an enzyme is very selective:
Active sites interact with specific molecules to catalyze specific reactions The molecule that binds to an enzyme is called its “substrate”
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Enzymes lower the activation energy required for a reaction to occur.
Stabilizes the transition state by stretching the bonds of the substrate
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Some enzymes need to bind to additional molecules to function:
Cofactors (usu. metal ions), or Coenzymes (act like shuttles btw. enzymes) Apoenzyme – The enzyme, without its cofactors/coenzymes Holoenzyme – The active form, bound to cofactors/coenzymes
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MODELS OF ENZYME ACTIVITY
Lock and Key model Induced fit model
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The “Lock and Key” model
The enzyme has an active site that is unchanging Substrates bind chemical process occurs
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Induced fit model The enzyme can change its shape
One substrate molecule binds weakly The enzyme’s active site changes shape so that a second substrate molecule can bind The second substrate binds Chemical process (rx) occurs
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FACTORS AFFECTING ENZYME ACTIVITY
Temperature pH
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Temperature
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Too much heat will disrupt the 2° , 3° and 4° structure
Increase in activity with temperature (molecules have more energy) but only to a certain point. Too much heat will disrupt the 2° , 3° and 4° structure Denaturation & loss of function
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Every enzyme has a temperature at which it functions best – this is the optimal temperature
For human enzymes it is usually 37°C (body temp.)
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pH Enzymes also have optimal pHs
These will vary according to the location in which they function Location Optimal pH Pepsin Stomach 2 Trypsin Small intestine 8
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REGULATION OF ENZYME ACTIVITY
Inhibition Allosterically Feedback inhibition
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Competitive inhibition
Are very similar in shape to an enzyme’s substrate. Bind to the active site, and physically block the correct substrate from binding.
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Competitive Inhibition
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Enzyme Efficiency / Rate of Rx
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Noncompetitive inhibition
May be allosteric OR The inhibitor directly affects the enzyme so that it cannot carry out its function. (chemicals that alter the enzyme’s shape and therefore function)
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Noncompetitive inhibition
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Noncompetitive inhibition
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Comparing the 2 inhibitions
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Allosteric Regulation
Allosteric site – Site on an enzyme that can bind with an effector. NOT the same as active site. Effector: Activator, or Inhibitor
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Inhibition vs Activation Inhibitors vs Activators
Some substances can inhibit enzyme function – Inhibitors Some substances can enhance enzyme function – activators Inhibition can be either competitive or noncompetitive
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Allosteric activator Allosteric inhibitor Stabilize the active-form
Stabilize the inactive form See pg. 73, Figure 7
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Feedback inhibition Often biological reactions occur in a series.
Feedback inhibition: The product of a series of enzyme-catalyzed reactions acts to allosterically inhibit an enzyme that acts earlier in the series.
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WHY IS FEEDBACK INHIBITION important?
5 minutes discussions: WHY DO CELLS NEED FEEDBACK? WHY DO YOU NEED FEEDBACK? “TWO-WAY” WORLD ANYONE?
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SOME APPLICATIONS Cheese-making Cow enzyme rennet
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Insulin for Type 1 diabetics
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Lactase to digest lactose
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There are three main enzymes found in a human body
digestive enzymes metabolic enzymes food enzymes
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Who’s ‘ase is it anyways?
Naming enzymes most end in “ase”
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