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Published byDarcy McKenzie Modified over 9 years ago
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if = 10 and = 0.05 per experiment = 0.5 Type I Error Rates I.Per Comparison II.Per Experiment (frequency) = error rate of any comparison = # of comparisons (frequency) III.Familywise (for independent comparisons) Per ComparisonFamilywisePer Experiment probability of at least one Type I error. Multiple Comparison
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Complete vs. Restricted H 0 123 4164 749 1010098114196 74986412144 131691419618324 749636864 41 59 8.2 11.8 383393377 =141 Treatments Independent Samples MS Treat MS error Complete H 0
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Restricted H 0 e.g., A Priori Comparisons Post Hoc Comparisons The role of overall F - might NOT pick up - changes Familywise
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A Priori Comparisons - replace individual or with MS error Multiple t tests (compare two conditions) - test t with df error Comparing Treatments 1 and 3 n.s.
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Linear Contrasts Compare: two conditions a set of conditions and a condition two sets of conditions Let for equal n’s
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(1) Contrasting Treatments 1 & 3 again = = = = SS contrast = SS error = MS contrast = always = 1 MS error = MS contrast = SS contrast = MS error = F (1,12) = (Look at t- test)
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(2) Contrasting Treatments 1 & 2 with 3 = = = = = = SS contrast = = SS error = MS contrast = = F (1,12) =
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(3) Contrasting Treatments 1 & 3 with 2 = = = = = = SS contrast = SS error = MS contrast = = F (1,12) =
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Orthogonal Contrasts = = # of comparisons = df Treat if n’s are equal df Treat = 2 in our example contrasts 1 and 2 = = = 2 and 3 = = = 1 and 3 = = = SS contrast1 SS contrast3 = = SS Treat =
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Bonferroni’s Control for FW error rate ( ) use = 0.01 Bonferroni Inequality e.g.: if, per comparison = 0.05 and if, 4 comparisons are made then, the FW CANNOT exceed p = 0.02 EW or FW c(PC ) c = # of comparisons Thus, we can set the FW or the per experiment to a desired level (e.g., 0.05) and adjust the PC If we desire a FW = 0.05 then: 0.05 = PC (4) 0.0125 = PC
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Bonferroni’s (comparing 2 means) using t 2 = F and moving terms This allows us to contrast groups of means. (linear contrasts) if
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Multistage Procedures Bonferroni: divides into equal parts Multistage (Holm): divides into different size portions ifor heterogenous S 2 ’s
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compare next largest to critical value C = C-1 compare largest s to critical Multistage 1.calculate alls 2.arrange in order of magnitude 3. value (Dunn’s Tables) ONLY if significant 4. 5. C = total # of contrasts to be made and so on FW is kept at 0.05 ( )
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Subject X Treatment Design I Weight each observation by its assigned condition weight II Compute D i for each subject III Sum D i across subjects IV Compute SS contrast V Compute SS SsXC(error) Linear Contrast
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Subjects123 1447 210914 37812 4131418 5768 Treatments 40-7-39 100-14-416 70-12-525 130-18-525 70-81 1876 Contrast 1 with 3 F (1,4) = 23.14 SS con = SS SsXcon = MS con = MS SsXcon = df = 4 DiDi Di2Di2
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Subjects123 1447 210914 37812 4131418 5768 -48-7-39 -1018-14-636 -716-12-39 -1328-18-39 -712-8-39 1872 Treatments Contrast 1 & 3with 2 DiDi Di2Di2 SS con = SS SsXcon = MS con = MS SsXcon = F (1,4) = 36
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SS con1 = = SS Treat Total = Orthogonal Contrasts Error term could be SS res or error SS SsXcon1 + SS SsXcon2 = ? 5.61.26.8 ??=+ df con1 + df con2 = df Treat 1+ 4 = 2 df SsXcon1 + df SsXcon2 = df ? 4+=8 SS con2 =
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