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PopMedNet Queries A Data Partner Perspective COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY Kevin Haynes, PharmD, MSCE, FISPE.

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Presentation on theme: "PopMedNet Queries A Data Partner Perspective COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY Kevin Haynes, PharmD, MSCE, FISPE."— Presentation transcript:

1 PopMedNet Queries A Data Partner Perspective COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY Kevin Haynes, PharmD, MSCE, FISPE

2 Outline From the point of receiving a query request email To working with the DataMart Query Tool To Windows-Linux file conversation Update the “User Inputs” Run the program And return results to requester COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY2

3 From the point of receiving a query request email COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY3 Regardless of Requester’s Network in PopMedNet

4 Access the DataMart Query tool in PopMedNet COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY4

5 Review Request COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY5

6 Download zipped package we create a new subfolder with the same name as the request, then we save the downloaded zip package to this new subfolder, and unzip to extract. COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY6

7 7

8 WinSCP to move files from windows to Linux Windows serverLinux server COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY8 Used to move files between Windows server and Linux server

9 Open SAS Enterprise Guide on SASEG server COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY9

10 SAS Enterprise Guide in Linux COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY10 %let mpname=to07_add_preg_ahr_wp007_nsdp_v01; libname Src_Data "/SAS_Data/GAR_Data/ModularPrograms/&mpname./inputfiles0"; libname Tgt_Data "/SAS_Data/GAR_Data/ModularPrograms/&mpname./inputfiles"; proc migrate in=Src_Data out=Tgt_Data; run;

11 11 1) Edit DPID and Site ID according to the table below %LET DPID=HC; %LET SITEID=OS; 2) Edit this section to reflect your name for each Table/File (or View) %let ENRTABLE=Enrollment; %let DEMTABLE=Demographic; %let DISTABLE=Dispensing; %let DIATABLE=Diagnosis; %let PROCTABLE=Procedure; %let ENCTABLE=Encounter; 3) Edit this section to reflect locations for the libraries/folders for Mini-Sentinel Data and Output folders /********** FOLDER CONTAINING INPUT DATA FILES AND MSCDM DATA ***************************************/ /* IMPORTANT NOTE: end of path separators are needed; */ /* Windows-based platforms: "\", e.g. "C:\user\sas\" and not "C:\user\sas"; */ /* Unix-based platforms: "/", e.g."/home/user/sas/" and not "/home/user/sas"; */ /* */ /********** FOLDER CONTAINING INPUT DATA FILES AND MSCDM DATA ***************************************/; /*Data in MSCDM Format*/ libname indata '/SAS_Work/GAR_WS1/ETL11/'; /*NDC/ICD9 Codes File Location*/ %let infolder=/SAS_Data/GAR_Data/ModularPrograms/to07_add_preg_ahr_wp007_nsdp_v01/inputfiles/; /*SAS Input Files*/ libname infolder "&infolder."; /********** FOLDER CONTAINING SUMMARY FILES TO BE EXPORTED TO Mini Sentinel Operations Center (MSOC)*/; /*CSV Output Files*/ %let MSOC=/SAS_Data/GAR_Data/ModularPrograms/to07_add_preg_ahr_wp007_nsdp_v01/msoc/; /*SAS Output Files*/ libname MSOC "&MSOC."; /****** FOLDER CONTAINING FINAL DATASETS TO BE KEPT LOCAL AT THE PARTNER SITE (DPLocal)**********/; /*CSV Output Files*/ %let DPLocal=/SAS_Data/GAR_Data/ModularPrograms/to07_add_preg_ahr_wp007_nsdp_v01/dplocal/; /*SAS Output Files*/ libname DPLocal "&DPLocal."; /****************************************************************************************/ /************************ PLEASE DO NOT EDIT CODE BELOW THIS LINE *************************/ Update SAS code “User Inputs”

12 Run program COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY12

13 WinSCP the MSOC folder to local windows COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY13

14 Prepare summary tables for QC Another team member QCs the results Zip folder and rename according to workplan requirements COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY14

15 Return results to Requester Contact requester when submission is complete COMPANY CONFIDENTIAL | FOR INTERNAL USE ONLY | DO NOT COPY15


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