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Organisation of the genetic material in pro- and eukariotic cells DNA, chromatin, chromosomes
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1 µm = 2 Megadalton (2 x 10 6 Dalton) = 3 kbp
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Genome Content Human Genome 3200 Mb Genes and gene-related sequences 1200Mb Intergenic DNA 2000 Mb Genes 48 Mb Related seq. 1152 Mb PseudogenesGene fragments Introns, UTRs Interspersed repeats 1400 Mb Other intergenic regions 600 Mb Microsatellites 90 Mb Various 510 Mb LINES 640 Mb SINES 420 Mb LTR elements 250 Mb DNA transposons 90 Mb SINE: Alu, 281 bp, 300.000 p, 9% LINE: L1, 6500 bp, 50.000 p, 7%, retrotransposon
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T phage of Esherichia coli ~ 50 m DNA.
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Single Circular DNA molecule of Escherichia coli, ~ 1,4 mm long
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~ 4 cm linear DNA molecule contains in a usual human chromosome
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E. coli: 4 639 221 nukleotide pairs, 4200 genes
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Relaxed Supercoiled Topoisomerases
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Nucleus of a eukariotic cells (electronmicrograph) Function: protection, transport, gene expression nuclear lamina HETEROCHROMATIN euchromatin heterochromatin nucleolus
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1 µm = 2 Megadalton (2 x 10 6 Dalton) = 3 kbp
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Types of the chromatin: eu- and heterochromatin Structure of the chromatin ; histons, nucleosomes, solenoid and loops
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Histones: small, basic, higly conserved proteins
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30 nm chromatin fiber: interactions and modifications of site chains of histones and H1 histon are necessary The sructure of the 30 nm chromatin fiber is variable (heterogen)
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11 and 30 nm chromatin fibers (electonmicrograph) „beads-on-a-string” structure solenoid
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H2A H2B H3 H4
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Chromatin structure and gene expresson in that area are hang on the chemical modification of histones (acetylations, metylation, phosphorylation)
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A „hiszton kód” hipotézis
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Condensins organise the loop-structure SMC = Structural Maintenance of Chromosomes family protein (part of the condensin complex)
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DNA Chromatin Loops Metaphase chromosome
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Chemical modification of the DNA (methylation) has role in regulation
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de novo metylases Imprinting
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XIST = X inactivaton specific transcript XIC = X inactivation center Histones also play role in the inactivation
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Localization of the chromosome 18 and chr. 19 in interphase nucleus
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The chromosome structure and the cell division Arms, centromer, telomers
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arms sisterchromatides Kinetochor microtubuls
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Lewin: Genes IX. Fig. 28.30
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Telomer and telomerase
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fibrillar granular light stained
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A magvacska funkciói
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Special chromosomes Politen chromosome – in salivary glands of Drosophila melanogaster Lampbrush chromosomes – amphybian oocytes
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Politen chromosomes
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RNA synthesis on the politen chromosomes
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Lampbrush chromosomes in an amphybian oocyte
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