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Unit III - Biochemistry Chemistry of Life
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I. What is everything made of? Matter – anything that has mass and takes up space Atoms – basic unit of matter; made of… Protons – positive charge Neutrons – no charge Electrons – negative charge a(an) – no/not tom – to cut
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I. What is everything made of? Isotopes – atoms of same element, but have different # of neutrons (some are heavier, but otherwise behave the same) a(an) – no/not tom – to cut a(an) – no/not tom – to cut iso - equal
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I. What is everything made of? Element – substance made up of only one type of atom; (stuff on the periodic table!) sodium (Na) chlorine (Cl)
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I. What is everything made of? Compound – two or more atoms chemically joined together Sodium chloride (NaCl; table salt)
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I. What is everything made of? Compounds are made through chemical reactions…new substances are made REACTANTS PRODUCTS sodium (Na) + chlorine (Cl) sodium chloride (table salt)
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I. What is everything made of? Mixture – two or more compounds physically joined together Solution – one substance (solute) dissolves in another (solvent) Suspension – large particles settle at the bottom
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I. What is everything made of? Mixtures are not “new” substances…they are just rearranged physically
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Self-Quiz Label as… E, C, or M (element, compound, or mixture) 1. oil 2. wood 3. water 4. carbon 5. starch 6. shampoo 7. air 8. silicon 9. sugar 10. cookies 11. copper
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Self-Quiz Label as… E, C, or M (element, compound, or mixture) 1. oil - C 2. wood - M 3. water - C 4. carbon - E 5. starch - C 6. shampoo - M 7. air - M 8. silicon - E 9. sugar - C 10. cookies - M 11. copper - E
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II. Water A. Why is Water Important to Organisms? Bathes cells In cytoplasm Needed for chemical reactions Used for transport Holds/transfers heat
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II. Water B. How does water’s structure relate to its function? 1. Water is polar – slight positive & negative charge on opposite ends of molecule
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II. Water 2. water’s charged sides attract to other molecules with charges These are called hydrogen bonds Are weaker than ionic/covalent, but they add up! water’s special traits due to these! hydro- water
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II. Water Water has many special properties, most of which occur because of the hydrogen bonding As you go through each of the properties be sure to look for 3 things: Definition of the property Why the property happens Why the property is important to organisms
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II. Water 3. special properties: a. surface tension – forms strong layer b. cohesion – water sticks to self well co - together
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II. Water 3. special properties: c. adhesion – water sticks to other stuff d. capillarity – water “climbs” up thin tubes
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II. Water 3. special properties: e. good solvent – water dissolves many substances ~ water will dissolve things that have charges (polar & ionic compounds)
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II. Water 3. special properties: f. high specific heat – - water holds its heat very well - hard to change its temperature
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II. Water 3. special properties: g. high heat of vaporization – - when water does change its temperature (higher) it “carries” heat with it
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II. Water 3. special properties: h. ice floats on water - solid H 2 O takes up more space, so less dense
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III. Acids & Bases 1. pH scale: 0-14 2. neutral = pH 7 3. acid = pH < 7 4. base = pH >7 * the closer to 7, the weaker it is
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III. Acids & Bases 5. buffers – keep pH stable Cells will be harmed if pH too high or low
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IV. Organic Compounds Organic compounds come from organisms All include very large molecules (polymers) that are built from smaller units called monomers mono - one poly - many
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IV. Organic Compounds There is a standard way of building polymers out of monomers To join monomers together, water is removed Called dehydration synthesis hydr – water syn - together
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IV. Organic Compounds There is a standard way of breaking polymers apart into their monomers To break polymers apart, water is added Called hydrolysis hydr – water lys - burst
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A. Carbohydrates IV. Organic Compounds A. Carbohydrates 1. examples Glucose (sugar) - cell energy Glycogen – how animals store extra glucose Starch – how plants store extra glucose Cellulose – makes up cell walls of plants; dietary fiber Chitin – makes up cell walls of fungi/insect exoskeletons
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A. Carbohydrates IV. Organic Compounds A. Carbohydrates 2. structure monosaccharide: polysaccharide: (monomer) (polymer) mono- one poly- many sacchar- sugar
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B. Lipids IV. Organic Compounds B. Lipids 1. examples – Triglycerides – fats, oils, waxes Steroids - hormones Phospholipids – make up cell membrane tri- three glyc- sugar
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B. Lipids IV. Organic Compounds B. Lipids 2. structure – nonpolar (do not like water); monomer is the fatty acid chain fats: steroids:
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B. Lipids IV. Organic Compounds B. Lipids 3. types saturated fats – hold as much H as possible; solid at room temp; animal fats
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B. Lipids IV. Organic Compounds B. Lipids 3. types unsaturated fats – missing H due to multiple bonds; liquid at room temp; plant oils
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B. Lipids IV. Organic Compounds B. Lipids 3. types – phospholipids: have polar side & nonpolar side; make up cell membrane
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C. Nucleic Acids IV. Organic Compounds C. Nucleic Acids 1. examples: DNA, RNA (genetic material) 2. function – hereditary info 3. monomer is the nucleotide:
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D. Proteins IV. Organic Compounds D. Proteins 1. examples: numerous! (major structural unit of body… muscles, skin, tendons, etc.) 2. functions–structure, enzymes, hormones,…
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D. Proteins IV. Organic Compounds D. Proteins 3. monomer is the amino acid:
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D. Proteins IV. Organic Compounds D. Proteins 3. structure – simple proteins: complex proteins: ex: used to build ex: chemical reactions
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D. Proteins IV. Organic Compounds D. Proteins 4. enzyme action – allows rxns to occur faster - every rxn in body has at least 1 enzyme - missing enzyme = defect - high heat and extreme pH will “break” them
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Self-Quiz – Chemistry 1. An example of an element would be: 1. An example of an element would be: A. NeB. CO2C. C6H12O6D. H2O 2. Which of the following is the weakest? 2. Which of the following is the weakest? A. ionic bondsC. hydrogen bonds B. electrovalent bondsD. covalent bonds
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Self-Quiz – Chemistry 3. Most of water’s special properties are due to the fact that it is – 3. Most of water’s special properties are due to the fact that it is – A. polar B. neutral C. covalent D. nonpolar 4. Ringed lipids are called - 4. Ringed lipids are called - A. triglycerides C. steroids B. phospholipids.D. both B and C.
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Self-Quiz – Chemistry 5. When your body has too much glucose, the extra is stored as glycogen. Glucose is a ____, or building block, of many ____. 5. When your body has too much glucose, the extra is stored as glycogen. Glucose is a ____, or building block, of many ____. A. monomer…triglycerides B. monomer…carbohydrates C. polymer…proteins D. polymer…nucleic acids
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Self-Quiz – Chemistry 6. Unsaturated fats: 6. Unsaturated fats: A. contain all the hydrogen atoms they can hold B. contain only single bonds between carbon atoms C. are usually solids at room temperature D. will kink/bend at double bonds between C atoms
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