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Published byAbigail Dalton Modified over 11 years ago
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Nov 2008 Scientific & technical presentation JChem for Excel
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Introduction Microsoft Excel integrated solution for Marvin and JChem functionality Use Excels powerful features: Functions, Sorting, Filtering, Charts… Implemented in C#.NET, and Visual Studio –Proof that ChemAxon APIs can be used in a Java- less.NET environment Easy to install and deploy UNDER RAPID DEVELOPMENT
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Features Import from Databases using custom filters Import from, and export to files. Searching and R-Group Decomposition Adding, editing structures Chemical functions among Excel functions
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Import from Database – Manage Connections JChem Cartridge Databases Structure search runs on the server JChem Base Databases –Structure search runs locally –Databases supported Oracle Coming: MSSQL, Access, MySQL,... Connection settings are saved
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Import from Database - Query Common interface for client-side or server-side structure searching Easy to use control for specifying search options Chemical Terms filter expressions for queries Optional substructure hit coloring and alignment Additional SQL filters
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Structure file import and export Most file formats supported by Marvin could be exported and imported –MRV,SDF,RDF,SMIL ES, IUPAC name,… Wizards guide you through the import and export processes
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Import - Results SDF import results Database import results with hit coloring
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Chemical Excel Functions Run Decomposition on – JChem Database – Files – Excel Worksheet
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Chemical Excel Functions Values are calculated from: –SMILES, SMARTS, IUPAC Name strings –Structure cells – structures resulting from imports, edit, or other functions –Marvin OLE Object (future) Function results are automatically updated when structures edited or added Example Excel expression for Lipinskis Rule of 5 (3 of 4): (JCMass(A2) =3
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Chemical Excel functions – Example 1 Property calculations for caffeine
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Chemical Excel functions – Example 2 logD vs. pH calculated and displayed in a chart from a SMILES input MolFormula, Composition, IUPAC Name calculated from CD_STRUCTURE
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Deployment MSI Installer –No configuration needed –Automatic deployment and updates through Active Directory
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Visit other technical presentations MarvinSketch/View http://www.chemaxon.com/MarvinSketch_View.ppt http://www.chemaxon.com/MarvinSketch_View.ppt MarvinSpace http://www.chemaxon.com/MarvinSpace.ppt http://www.chemaxon.com/MarvinSpace.ppt Calculator Plugins http://www.chemaxon.com/Calculator_Plugins.ppt http://www.chemaxon.com/Calculator_Plugins.ppt JChem Base http://www.chemaxon.com/JChem_Base.ppt http://www.chemaxon.com/JChem_Base.ppt JChem Cartridge http://www.chemaxon.com/JChem_Cartridge.ppt http://www.chemaxon.com/JChem_Cartridge.ppt Standardizer http://www.chemaxon.com/Standardizer.ppt http://www.chemaxon.com/Standardizer.ppt Screen http://www.chemaxon.com/Screen.ppt http://www.chemaxon.com/Screen.ppt JKlustor http://www.chemaxon.com/JKlustor.ppt http://www.chemaxon.com/JKlustor.ppt Fragmenter http://www.chemaxon.com/Fragmenter.ppt http://www.chemaxon.com/Fragmenter.ppt Reactor http://www.chemaxon.com/Reactor.ppt http://www.chemaxon.com/Reactor.ppt
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