1. Chapters 18 & 19 Bacteria Viruses & Operon Systems

2. Introductory Questions # 1)How is Transduction different from conjugation? 2)Why are transposons called “jumping genes”? What purpose do the insertion sequences play? 3)Name the two scientists that discovered the Lac operon system. 4)How are repressible operons different from inducible operons? Give an example of each. 5)What is the difference between an operator and a promoter? 6)Name three example of a virus that has DNA as its genetic material and three examples of Viruses with RNA as its genetic material. 7)Briefly explain what a vaccine is and what it does.

3. Key Topics for Ch. 18 TopicPgs. Bacteria:Genetic recombination 346-350 Plasmids & Conjugation Transformation (Lab) Transposons: 351-352 Lac Operon System 353-356 RegulatingGene Expression Viruses: DNA, RNA (retroviruses) 334-342 Lytic & Lysogenic Cycle 337-339

4. Relative size Differences between of Viruses, Prokaryotes, and Eukaryotes

5. Bacterial Reproduction of DNA

6. Transformation Uptake of foreign DNA from the environment What we did in our lab (pGLO plasmid) Requires unique cell-surface proteins that can recognize similar strands of DNA, bind to it, and allow uptake.

7. Conjugation and the transfer of the F Plasmid

8. Transduction

9. Detecting Genetic Recombination in Bacteria

10. Recombination by Insertion Sequences & Transposable Elements Always a part of chromosomal or plasmid DNA Sometimes called “jumping genes” -never detach (discovered by Barbara Mcclintock) Insertion seq. = prokaryotes that have A single gene that codes for: transposase Inverted sequences are on each side of an insertion sequences. Observed in bacteria only. –See pg. 352 Specialized plasmids are constructed using these sequences.

11. Jacob & Monod Discovered Lac Operon – Nobel Prize for Discovering Control of Gene Expression

12. Regulation of a Metabolic Pathway

13. OPERON THEORY Operon = group of structural genes regulated as a unit + promotor + operator Several genes controlled by an operator site

14. Specialized Genes Operator = "on/off" switch for operon Regulator = makes repressors to turn off an entire operon Repressor = Binds to operator, turn off gene expression Inducer = Joins with an active repressor, inactivates it Co-repressor = Joins with inactive repressor, converts it to active

15. Operon Complex RNA Polymerase must bind to the promoter site and continue past the operator site to transcribe mRNA

17. Repressible Operons (trp operon) Usually “ON” - to turn OFF: –Co-repressor needs to bind to an inactive repressor and activate it –RNA Polymerase then cannot bind and transcribe mRNA Ex. trp operon is a repressible operon: -trancription is usually on -inhibited only by tryptophan (corepressor)

18. Trp Operon when Tryptophan is Absent http://highered.mcgraw-hill.com/sites/0072437316/student_view0/chapter18/animations.html# http://highered.mcgraw-hill.com/sites/0072437316/student_view0/chapter18/animations.html#

19. Lac operon Produces B-galactosidae which breaks down Lactose

20. INDUCIBLE Operons (ex. lac operon) Usually “OFF” - to turn ON: –INDUCER needs to bind to an active repressor and inactivate it –RNA Polymerase can then bind and transcribe mRNA Ex. Lac operon is an inducible operon

21. Lac Operon Lactose ONLY used when glucose is not present in large quantities When glucose is present, cAMP levels are low, cAMP cannot bind to CAP and initiate enzyme production

22. Inactive Repressor-Lactose Present http://highered.mcgraw-hill.com/sites/0072437316/student_view0/chapter18/animations.html http://highered.mcgraw-hill.com/sites/0072437316/student_view0/chapter18/animations.html Allolactose is an isomer of Lactose

23. Lac Operon In absence of glucose, cAMP levels are HIGH, binding to CAP can occur Beta-Galactosidase is made

24. Lac Operon RNA polymerase only binds efficiently when cAMP-CAP complex is in place Lac Operon = an INDUCIBLE Operon Lactose = an INDUCER –Binds to repressor and inactivates it

25. Lac Operon Summary

26. DNA & RNA Viruses

27. Lytic & Lysogenic Cycles of a Virus (Lysogenic:host is not destroyed)

28. 5 Classes of Viruses-Pg. 340

29. Examples of Common Viruses DNARNA HerpesvirusEbola PoxvirusInfuenza Papovirus (warts)HIV Measels, Mumps Rabies West Nile

30. HIV Infection (pgs 340-342)

31. HIV infection on a White Blood Cell

32. Invasion of a Virus

34. Key Concepts for Chapter 19 Review of DNA & Genome359-362 Oncogenes & Proto-Oncogenes370-373 Tumor Supressor Genes McClintok’s transposons375-376

35. Introductory Questions # 1)How is an “F plasmid” different from an “R plasmid”? 2)How are repressible operons different from inducible operons? Give an example of each. 3)What is the difference between an operator and a promoter? 4)Name three example of a virus that has DNA as its genetic material and three examples of Viruses with RNA as its genetic material. (See the table) 5)Briefly explain what a vaccine is and what it does. 6)What are transposable elements and what do they do? 7)Why are transposons called “jumping genes”? What purpose do the insertion sequences play? 8)What is the difference between an oncogene and a tumor repressor gene?

36. The Biology of Cancer Oncogenes & Proto-oncogenes

37. Molecular Biology of Cancer pgs. 370-371 Oncogene cancer-causing genes Proto-oncogene normal cellular genes How? 1-movement of DNA; chromosome fragments that have rejoined incorrectly 2-amplification; increases the number of copies of proto-oncogenes 3-proto-oncogene point mutation; protein product more active or more resistant to degradation Tumor-suppressor genes changes in genes that prevent uncontrolled cell growth (cancer growth stimulated by the absence of suppression)