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1 Using Ontologies in Clinical Decision Support Applications Samson W. Tu Stanford Medical Informatics Stanford University.

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Presentation on theme: "1 Using Ontologies in Clinical Decision Support Applications Samson W. Tu Stanford Medical Informatics Stanford University."— Presentation transcript:

1 1 Using Ontologies in Clinical Decision Support Applications Samson W. Tu Stanford Medical Informatics Stanford University

2 2 Main points Information technology has the potential to advance patient care by improving clinician adherence to clinical practice guidelines Principled architecture that separates ontologies, knowledge bases, and problem- solving components allows development and deployment of maintainable complex software systems EON and ATHENA projects demonstrate use of ontologies in clinical decision support applications

3 3 EON project NLM-funded project at Stanford (PI: Dr. Musen) Develop methodology, ontologies, and software components for creating decision-support system for guideline-based care Use Protégé knowledge-acquisition methodology and tool for construction of Domain concept ontologies Patient information model Guideline knowledge bases Develop software components that assist clinicians in specific tasks Therapy-advisory and eligibility-determination servers Database mediator for time-oriented queries Explanation and visualization facilities

4 4 EON architecture Clients Servers Protocol Eligibility Checker Therapy Advisory Server Protégé Temporal Mediator Yenta Eligibility Client Yenta Advisory Client Clients Patient Database Protégé Knowledge Base EON Guideline Ontology Medical Domain Ontology Patient Data Model Guidelines

5 5 ATHENA project Funded by VA Research Service HSR&D (PIs: Drs. Hoffman and Goldstein, VA clinicians and Stanford faculties) Hypothesized that guideline-based interventions in management of hypertension can Change physicians prescribing behavior Change patient outcome Deployed and evaluated at primary care VA clinics in 9 geographically diverse cities over a 15-month clinical trial Results Expert clinicians maintain hypertension knowledge base using Protégé Clinicians interacted with the ATHENA Hypertension Advisory at 54% of all patient visits Impact on prescribing behavior and change patient outcome being analyzed

6 6 ATHENA Clients Advisory Client Event Monitor Building ATHENA system from EON components Patient Database ATHENA Clients EON Servers Guideline Interpreter Advisory Client Event Monitor Temporal Mediator VA CPRS VA DHCP Data Converter nightly data extraction Guideline Knowledge Base Protégé ATHENA GUI

7 7 What the Clinician Sees…

8 8 ATHENA HTN Advisory BP targets Primary recommendation Drug recommendation

9 9 ATHENA HTN Advisory: More Info

10 10 ATHENA HTN Advisory: Link to evidence base

11 11 EON ontologies Guideline ontology Patient information model (generalizes to HL7 RIM) Generic data types (generalize to HL7 data types) Medical concept ontology (generalizes to standard terminologies)

12 12 Physician-maintained hypertension knowledge base

13 13 Benefits of ontology-based clinical information systems Separation of declarative domain knowledge and procedural problem-solving knowledge allow Content experts to maintain knowledge bases Standardization of ontologies that leads to sharing and interoperability Semantically rich ontologies allow sophisticated reasoning and decision support e.g., automatic concept classification based on description logic e.g., detailed drug recommendations based on computable model of clinical practice guidelines


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