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A method of data sharing in 2007 PRIME project and a study of its integration into NAREGI data grid environment UPDATE Eisaku Sakane Cybermedia center.

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Presentation on theme: "A method of data sharing in 2007 PRIME project and a study of its integration into NAREGI data grid environment UPDATE Eisaku Sakane Cybermedia center."— Presentation transcript:

1 A method of data sharing in 2007 PRIME project and a study of its integration into NAREGI data grid environment UPDATE Eisaku Sakane Cybermedia center Osaka University PRAGMA 14 Workshop March 11, 2008 National Museum of Natural Science, Taichung

2 Research Objective of PRIME 2007 Big Ultimate Objective: Big Ultimate Objective: + build/visualize/mathematically analyze 3D cardiomyocyte (Heart Cell) model --> High Resolution --> Finite Elements --> Normal & Failing Hearts --> Base on Realistic Anatomical Structures Research Center for Ultra-High Voltage Electron Microscopy UHVEM - Osaka Univ. Cardiac Mechanics Research Group CMRG - UCSD National Center for Microscopy and Imaging Research NCMIR - UCSD Cybermedia Center CMC - Osaka University *Acknowledgement: Young Chun, UCSD

3 National Center for Microscopy and Imaging Research UHVEM Storage Cybermedia Center IMOD (X11 client) data Overall UHVEM - CMC - NCMIR Data flow WebDAV CCD camera controller SCP/SFTP Cell Centered Database data Research Center for Ultra-High Voltage Electron Microscopy X11 server

4 National Center for Microscopy and Imaging Research UHVEM Gfarm-VO Cybermedia Center IMOD data Integration into NAREGI data grid WebDAV CCD camera controller SCP/gfreg (gfarm) Cell Centered Database data Research Center for Ultra-High Voltage Electron Microscopy NAREGI Portal SS/IS GridVMs data Tomographic/3D reconstruction Virtual Organization ``Data provider VOMS

5 Gfarm-VO Gfarm client proxy cert. with VO attributes VO name VO1 VO3 VO2 Auto selection VO name Select suitable spool dir. gfsd RP provides storages for VO1 and VO2.

6 Current Status We are building an experimental system for NAREGI data grid at CMC: –Based on NAREGI M/W β2 –Gfarm-VO –VOMS A VO composed of UHVEM, NICMIR, CMC –Design a function of importing data into Gfarm filesystem automatically


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