1. Working Group Meeting 2013 Objective 3: Deploy tools to increase user-specified flexible queries

2. Current model 2 MaizeGDB currently allows researchers to access data record-by-record

3. Goal DATA: Generating sets of data ANALYSIS: Extracting information based on a set of data 3 Allow researchers access to larger sets of data

4. Generating sets of data Physical location Co-occupancy Characteristics Co-Expression Function 4

5. Extracting data based on a set of data DATA: Sequence Annotations Attributes ANALYSIS Enrichment Expression 5

6. BioMart Free, Open Source Standardized Allows integration Flexible Plant DBs: Gramene, Ensembl Plants, Rice-Map, Potato database, Phytozome MODs : WormBase, Mouse Genome Informatics, and SalmonDB. 6

7. Sequence 7

8. Annotations 8

9. Attributes 9

10. InterMine Free, Open Source Data model is flexible and extensible Fast and flexible querying Web interface and analysis tools (focus on list analysis) Actively being developed and deployed: RatMine, MouseMine, YeastMine, WormMine, ZFINMine, and FlyMine 10

11. Enrichment 11