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Cindy Zheng, PRAGMA9, 10/21/2005 PRAGMA Grid Testbed & Routine-basis Experiments May – October 2005 Cindy Zheng Pacific Rim Application and Grid Middleware.

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Presentation on theme: "Cindy Zheng, PRAGMA9, 10/21/2005 PRAGMA Grid Testbed & Routine-basis Experiments May – October 2005 Cindy Zheng Pacific Rim Application and Grid Middleware."— Presentation transcript:

1 Cindy Zheng, PRAGMA9, 10/21/2005 PRAGMA Grid Testbed & Routine-basis Experiments May – October 2005 Cindy Zheng Pacific Rim Application and Grid Middleware Assembly San Diego Supercomputer Center University of California, San Diego http://pragma-goc.rocksclusters.org

2 Cindy Zheng, PRAGMA9, 10/21/2005 PRAGMA Grid Testbed AIST, Japan CNIC, China KISTI, Korea ASCC, Taiwan NCHC, Taiwan UoHyd, India MU, Australia BII, Singapore KU, Thailand USM, Malaysia NCSA, USA SDSC, USA CICESE, Mexico UNAM, Mexico UChile, Chile TITECH, Japan UMC, USA UZurich, Switzerland GUCAS, China http://pragma-goc.rocksclusters.org

3 Cindy Zheng, PRAGMA9, 10/21/2005 PRAGMA Grid resources http://pragma-goc.rocksclusters.org/pragma-doc/resources.html http://pragma-goc.rocksclusters.org/pragma-doc/resources.html

4 Cindy Zheng, PRAGMA9, 10/21/2005 QMMD http://pragma-goc.rocksclusters.org/applications/qmmd/qmmd_requirement.html http://pragma-goc.rocksclusters.org/applications/qmmd/qmmd_requirement.html Quantum mechanics application Ninf-G based Driver: Hiroshi Takemiya (AIST) Running on 6+4 sites for 5 days Ready on 12 sites: –AIST: Yoshio Tanaka, Yusuke Tanimura –ASCC: Hurng-Chun Lee, Mike Chiang –CNIC: Kai Nan, Kevin Dong –KISTI: Jysoo Lee, Jae-Hyuck Kwak –KU: Somsak Sriprayoonsakul, Sugree Phatanapherom –NCHC: Weicheng Huang, Chien-Lin Huang –NCSA: Radha Nandkumar, Tom Roney –SDSC: Mason Katz, Cindy Zheng –TITECH: Satoshi Matsuoka, Hitoshi Aoki –UNAM: Jose Luis Gordillo Ruiz, Eduardo Murrieta Leon –UoHyd: Arun Agarwal, Rajeev Wankar, Neelakanta Reddy –USM(hawk): Habibah Wahab, Suhaini Ahmad

5 Cindy Zheng, PRAGMA9, 10/21/2005 Savannah http://pragma-goc.rocksclusters.org/applications/savannah/default.html http://pragma-goc.rocksclusters.org/applications/savannah/default.html Wildfire simulation Nimrod/G based Driver: Colin Enticott (MU) Ready on 10 sites: –AIST: Yoshio Tanaka, Yusuke Tanimura –ASCC: Hurng-Chun, Lee, Mike Chiang –KISTI: Jysoo Lee, Jae-Hyuck Kwak –KU: Sugree Phatanapherom, Somsak Sriprayoonsakul –MU: David Abramson –NCHC: Weicheng Huang, Chien-Lin Huang –NCSA: Radha Nandkumar, Tom Roney –SDSC: Mason Katz, Cindy Zheng –TITECH: Satoshi Matsuoka, Hitoshi Aoki –UNAM: Jose Luis Gordillo Ruiz, Eduardo Murrieta Leon –UoHyd: Arun Agarwal, Rajeev Wankar, Neelakanta Reddy

6 Cindy Zheng, PRAGMA9, 10/21/2005 Gfarm http://pragma-goc.rocksclusters.org/applications/gfarm/gfarm.html http://pragma-goc.rocksclusters.org/applications/gfarm/gfarm.html Gfarm – grid virtual file system Development lead: Osamu Tatebe (AIST) Ready on 7 sites: – AIST: Yusuke Tanimura, Yoshio Tanaka – ASCC: Mike Chiang, Hurng-Chun, Lee – KISTI: Jae-Hyuck Kwak, Jysoo Lee – NCHC: Chien-Lin Huang, Weicheng Huang – NCSA: Tom Roney, Radha Nandkumar – SDSC: Cindy Zheng, Mason Katz – TITECH: Hitoshi Aoki, Satoshi Matsuoka

7 Cindy Zheng, PRAGMA9, 10/21/2005 Community Scheduling Framework http://pragma-goc.rocksclusters.org/softdepot/zding_csf.ppt http://pragma-goc.rocksclusters.org/softdepot/zding_csf.ppt Interface GT4 and local schedulers Implementation and deployment lead: XiaoHui Wei and ZhaoHui Ding (JLU) Supported by: –SDSC: Wilfred Li, Cindy Zheng –AIST: Yoshio Tanaka 4 CSF 2 43 PBS SGE

8 Cindy Zheng, PRAGMA9, 10/21/2005 iGAP http://pragma-goc.rocksclusters.org/applications/igap/igap.html http://pragma-goc.rocksclusters.org/applications/igap/igap.html Genome annotation pipeline Use CSF/Gfarm Driver: Wilfred Li (SDSC) Ready on 7 sites: – AIST: Yoshio Tanaka, Yusuke Tanimura – ASCC: Hurng-Chun Lee, Mike Chiang – KISTI: Jysoo Lee, Jae-Hyuck Kwak – NCHC: Weicheng Huang, Chien-Lin Huang – NCSA: Radha Nandkumar, Tom Roney – SDSC: Mason Katz, Cindy Zheng – TITECH: Satoshi Matsuoka, Hitoshi Aoki

9 Cindy Zheng, PRAGMA9, 10/21/2005 SCMSWeb http://pragma-goc.rocksclusters.org/scmsweb/ http://pragma-goc.rocksclusters.org/scmsweb/ Grid monitoring + accounting Development lead: KU: Putchong Uthayopas, Somsak Sriprayoonsakul, Sugree Phatanapherom Collaborations: –Solaris porting at CICESE: Raul Hazas, Areli Garcia –IA64 porting at CNIC: Kevin Dong Deployed on 15 sites: –AIST: Yoshio Tanaka, Yusuke Tanimura –ASCC: Hurng-Chun Lee, Mike Chiang –BII: Stephen Wong, Damien Leong Wye Kit –CICESE: Raul Hazas, Salvador Castaneda, Julian Delgado –CNIC: Kai Nan, Kevin Dong –KISTI: Jysoo Lee, Jae-Hyuck Kwak –KU: Sugree Phatanapherom, Somsak Sriprayoonsakul –NCHC: Weicheng Huang, Chien-Lin Huang –NCSA: Radha Nandkumar, Tom Roney –SDSC: Mason Katz, Cindy Zheng –TITECH: Satoshi Matsuoka, Hitoshi Aoki –UChile: Alejandro Jofre, Juan Carlos Maureira –UNAM: Jose Luis Gordillo Ruiz, Eduardo Murrieta Leon –UoHyd: Arun Agarwal, Rajeev Wankar, Neelakanta Reddy –USM(hawk): Habibah Wahab, Suhaini Ahmad

10 Cindy Zheng, PRAGMA9, 10/21/2005 MOGAS http://ntu-cg.ntu.edu.sg/pragma/gridacctinfo http://ntu-cg.ntu.edu.sg/pragma/gridacctinfo Grid accounting system Development lead: NTU – Francis Lee, Junwei Lee Deployed on 7 sites: –AIST: Yoshio Tanaka, Yusuke Tanimura –KISTI: Jysoo Lee, Jae-Hyuck Kwak –NCSA: Radha Nandkumar, Tom Roney –SDSC: Mason Katz, Cindy Zheng –TITECH: Satoshi Matsuoka, Hitoshi Aoki –UNAM: Jose Luis Gordillo Ruiz, Eduardo Murrieta Leon –USM(hawk): Habibah Wahab, Suhaini Ahmad

11 Cindy Zheng, PRAGMA9, 10/21/2005 Grid-enabling Applications Ocean science (CICESE, Mexico) –IGrid05 demo Raul Hazas, Luis Farfán, Salvador Castaneda, Julian Delgado GAMESS/APBS (UZurich, Switzerland) Kim Baldridge, Celine Amoreira FLARM, Drug-design (CNIC, China) Bin Shen, Kevin Dong San Andreas Fault simulation (iGEON) Mian Liu (UMC), Huai Zhang (GUCAS)

12 Cindy Zheng, PRAGMA9, 10/21/2005 Ninf-G/NMI/Rocks Integration Ninf-G-2.4/NMI –Lead integrators: Yoshio Tanaka (AIST) Mats Rynge (NMI) Ninf-G 2.4 Rocks Roll –Lead integrators: Mason Katz (SDSC) Yoshio Tanaka (AIST)

13 Cindy Zheng, PRAGMA9, 10/21/2005 Naregi-CA - certificate authorization system Gama - trust management system Collaborators: –Naregi, Japan Shinichi Mineo Takto Okuno –SDSC, USA Sandeep Chandra Kurt Mueller Mason Katz Cindy Zheng GAMA GAMA/Naregi-CA Integration

14 Cindy Zheng, PRAGMA9, 10/21/2005 Network Measurements http://pragma-goc.rocksclusters.org/pragma-grid-status/testbed_amp.htm http://pragma-goc.rocksclusters.org/pragma-grid-status/testbed_amp.htm Deployed NLANR AMP to all testbed sites AMP data map on pragma-goc AMP map software –PRIME project –AMP data interface Collaborators: –NLANR: Tony McGregor, Ronn Ritke, Bud Hale, Jeremy Kallstrom –UCSD: Peter Arzberger, Cindy Zheng, John Lee –CNIC: Kai Nan, Kevin Dong –UChile: Alejandro Jofre, Juan Carlos Maureira –UoHyd: Arun Agarwal, Vinod Kumar –USM(hawk): Suhaini Ahmad, Habibah Wahab, Ruzaimi Azizan –UZurich: Kim Baldrige, Wibke Sudholt

15 Cindy Zheng, PRAGMA9, 10/21/2005 Group paper Issues and Methods for Building a Multi-Application International Grid Resource Cindy Zheng, Mason Katz, Peter Arzberger, Philip M. Papadopoulos University of California, San Diego, USA Yoshio Tanaka, Yusuke Tanimura, Osamu Tatebe National Institute of Advanced Industrial Science and Technology, Japan David Abramson, Colin Enticott, Slavisa Garic, Shahaan Ayuub Monash University, Australia Putchong Uthayopas, Somsak Sriprayoonsakul, Sugree Phatanapherom Kasetsart University, Thailand Jae-Hyuck Kwak Korea Institute of Science and Technology Information, Korea

16 Cindy Zheng, PRAGMA9, 10/21/2005 Thank you http://pragma-goc.rocksclusters.org

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