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Chemistry of Biomolecules
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Most biological compounds are ORGANIC – compounds of CARBON The study of these compounds is ORGANIC CHEMISTRY.
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Carbon! Why it’s cool, and what it can do
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6 electrons 2 - 4
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ORGANIC = CONTAINING CARBON The fact that Carbon has 4 electrons in its outer valence level, means it can make four covalent bonds with other atoms. It can also do neat things like: form long chains, branches, rings, and double bonds
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Monomers & Polymers: when carbons get together Individual units called MONOMERS are linked together to form big molecules called POLYMERS. monomer + monomer + monomer = Polymer
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A polymer of glucose (sugar) units
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Very large polymers made from Carbon- based chains are called MACROMOLECULES “Macro” = giant (so, “giant molecule”)
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How do monomers come together to form a polymer? Dehydration Synthesis: Chemical reaction where two monomers join together and release water.
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How do polymers break down into monomers? Hydrolysis: Chemical reaction in which water is added and splits a polymer back into monomers
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Hydrolysis of a disaccharide
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MACROMOLECULES come in different varieties 4 important groups: –Carbohydrates –Proteins –Lipids –Nucleic Acids
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What type of macromolecule is shown here?
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Carbohydrates Monomer = monosaccharide –Ex: glucose, fructose, galactose Function: energy, structure Example: Sugar, cellulose (crunchy part of plants), starch, glycogen (glucose storage in the liver)
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Facts about carbs Carbohydrates include C. H, and O in a 1:2:1 ratio, such as in glucose C 6 H 12 O 6. They exist as rings with an integral Oxygen and many H and OH groups. The simplest are monosaccharides, such as glucose, fructose, or galactose.
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Glucose C 6 H 12 O 6 – a monosaccharide
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Disaccharides Disaccharides have two rings, such as sucrose which is table sugar.
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Lactose – milk sugar
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Polysaccharides – many monosaccharides linked together, such as in glycogen, starch, and cellulose
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Types of polysaccharides a. Glycogen: Animal glucose storage in the liver and muscles b. Starch: Plant energy storage. c. Cellulose: wood, plant material Most abundant carbohydrate
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Glycogen in liver cells
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Plant starch in potato cells
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Cellulose fibers in plant cells
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Models of carbohydrates
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Test for Sugars the Benedict’s Test
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Test for starch - iodine
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What type is shown here? (Okay, there are a few “hints”.)
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Proteins Monomer = amino acid (20 of them) Functions 1.Structure – muscle proteins 2.Fight disease - antibodies 3.Control rates of reaction - enzymes 4.Transport substances in & out of the cell - hormones, channel proteins
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An Amino Acid
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The structure of an amino acid AMINO GROUP ACID GROUP The R groups is any atom or group of atoms. It makes each amino acid unique.
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Structure of an Amino Acid
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There are 20 different amino acids with different R groups.
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Amino acids are held together by peptide bonds
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Peptide Bond Formation Notice the loss of a water molecule.
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A Polypeptide is many amino acids linked together…. beginning of a protein
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Proteins have complex shapes that determine their function.
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The levels of protein structure Primary – chains of amino acids Secondary – folds Tertiary – compacting Quaternary – two or more chains
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What level is shown here in the protein insulin? Quaternary – Two chains
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If the primary structure is disrupted,then the protein may not be shaped correctly and will not be able to function as in hemoglobin in the disease sickle cell anemia.
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Test for protein the Biuret test
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What type of macromolecule is shown here?
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Lipids Function: –C–Chemical messengers (steroids) –I–Insulation and cushioning –L–Long lasting energy source Examples: –F–Fats and oils –P–Phospholipids (cell membrane fats) –S–Steroids (cholesterol) –c–composed of: fatty acids on a “glycerol backbone” Are NOT SOLUBLE in water!
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Joined to three fatty acid tails composed of: fatty acids and a “glycerol backbone” ACID group Fatty acids have many C-H bonds - good energy source.
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When three fatty acids join to the glycerol molecule, three water molecules are lost. Glycerol Fatty Acids Lipids
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To separate parts of the fat molecules, you have to add 3 water molecules in a hydrolysis reaction Hydrolysis of a triglyceride
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Saturated fats have only C TO C single bonds in their fatty acid “tail”. Unsaturated fats have one or more C = C double bonds in their fatty acid tail.
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Fats and Oils Saturated fatty acids (butter, fats) are solid at room temperature Unsaturated fatty acids (oils) are liquid at room temperature and better for you and your arteries.
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Polyunsaturated more than one C-C double bond
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Is there a shorter way to represent these BIG molecules?
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Short-hand way to write a fatty acid. The end away from the acid end is the Omega end. Omega end
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An Omega – 3 – fatty acid OMEGA END
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Omega 3 fatty acids are better for you than Omega 6 ones.
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Trans Fats are not good for you.
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Food labels help you decide if the food you are eating is healthy.
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Due to their chemical structure, lipids are not soluble in water.
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Phospholipids – used in cell membranes They have a phosphorus atom in their structure. The Polar Part is attracted to water so HYDROPHILIC Tails are HYDROPHOBIC.
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The Polar Part is attracted to water so HYDROPHILIC Tails are HYDROPHOBIC.
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Another type of lipid that makes up cell membranes is cholesterol. It is a steroid and exists as fused rings.
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Cell membranes and lipids
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A test for fats is a “greasy” transparent spot on paper.
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Nucleic Acids Monomer = nucleotide Function: –In heredity – DNA makes up genes –Direct production of proteins Examples: DNA and RNA
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Can you identify this type of macromolecule?
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A nucleotide is made of a sugar, phosphate group, and a Nitrogen base. The Nitrogen Bases have Four different Ones.
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DNA’s main job To code for the amino acids that make a PROTEIN RNA helps.
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So, hope you have it! Because this is a QUIZ!
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1, How many bonds go to each Carbon?
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2. Is this a monosaccharide, disaccharide, or polysaccharide?
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3. Is this fat saturated or unsaturated?
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4. This is a phospholipid found in cell membranes. Which part (color) is hydrophobic?
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5. What is this a model of?
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