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The Chemistry of Life
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Atoms The basic unit of matter Greek, atomos meaning “unable to cut” Named after Democritus...there has to be a limit =atom.
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Atoms What does an atom consist of? Subatomic particles: protons (+), neutrons, and electrons (-). What is the center of an atom called? Nucleus Where do we find electrons? Constant motion surrounding the nucleus.
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SUBATOMIC PARTICLES Why are atoms neutral despite having charged particles? Atoms have equal numbers of electrons and protons/have equal, but opposite charges. (they balance out)
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Elements and Isotopes What is a chemical element? A chemical element is a pure substance that consists entirely of one type of atom (C, Na, H, N, O, etc.) What is an isotope? Atoms of the same element w/ different number of neutrons.
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Isotopes of Carbon Nonradioactive carbon-12 Nonradioactive carbon-13 Radioactive carbon-14 6 electrons 6 protons 6 neutrons 6 electrons 6 protons 8 neutrons 6 electrons 6 protons 7 neutrons Because they have the same number of electrons, all isotopes of an element have the same chemical properties.
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Chemical Compounds What is a chemical compound? Substance formed by the chemical combination of two or more elements. H 2 0, NaCl, C 6 H 12 0 6
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Chemical Bonds What are the main types of chemical bonds? Ionic & Covalent Ionic- electrons transfer from one atom to the other. Sodium atom (Na) Chlorine atom (Cl) Sodium ion (Na + ) Chloride ion (Cl - ) Transfer of electron Protons +11 Electrons -11 Charge 0 Protons +17 Electrons -17 Charge 0 Protons +11 Electrons -10 Charge +1 Protons +17 Electrons -18 Charge -1
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Chemical bonds Covalent Bonds- electrons are shared b/w atoms = molecule. What molecule is this?
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Hydrogen Bonds A single water molecule may be involved in as many 4 hydrogen bonds at the same time. Cohesion: attraction b/w molecules of the same substance. Adhesion: attraction b/w different substances. Meniscus
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Properties of Water Water is polar: there is an uneven distribution of electrons b/w the oxygen and hydrogen atoms. Why is this important? Water can react to form ions: H 2 0 -> H + + OH - Hydrogen ion Hydroxide ion
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Acids, Bases, and pH pH: ranges 0 to 14 Acids: contain higher [ ] of H + ions than pure water and have a pH below 7. Bases: contain lower [ ] of H + ions than pure water and have pH values above 7.
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Buffers Weak acids or bases that can react w/ strong acids or bases to prevent changes in pH. Why is this important?
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Carbon Compounds What is the difference b/w organic/inorganic chemistry? Carbon Carbon forms strong covalent bonds and can join other carbon atoms to from long chains (carbon-carbon bonds) Four valence electrons No others like it.
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Macromolecules Four groups of organic compounds “Giant molecules” Carbohydrates (starch and sugar) − Living things main source of energy − Monosaccharide's/polysaccharides, “ose” Lipids (cooking oil) − Mostly CH, used to store energy − Saturated, unsaturated Nucleic Acids (RNA & DNA) (CHNOP) Proteins (polymers of amino acids) (CHNO) − AA are compounds w/an amino group (-NH2) and a carboxyl group (-COOH), what distinguishes each AA?
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Amino Acids General Structure
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Recognizing Macromolecules Organic or Inorganic? Nucleic Acid Glucose Lipids
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Chemical Reactions & Enzymes Why are chemical reactions important? Chemical reaction: a process that changes into another set of chemicals. CO 2 + H 2 O H 2 CO 3 H 2 CO 3 CO 2 + H 2 O What are reactants? What are products? Chemical reactions always involve the breaking of bonds in reactants and the formation of new bonds in products.
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Energy in Reactions To stay alive organisms need to carry out reactions. Growing, breathing, think, etc. Activation energy: the energy needed to get a RxN started. Can you tell which is an energy absorbing reaction/energy releasing reaction?
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Enzymes Some chemical reactions are too slow... Catalyst: substance that speeds up the rate of a chemical reaction; lowers activation energy Enzymes (“ase”) are biological catalyst; speed up chemical reactions that take place in the cell. Lipase Carbonic anhydrase Amylase
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Enzyme Action How do they work? Enzyme-Substrate Complex The reactants of enzyme-catalyzed reactions are known as substrates. Not random; active site and substrate fit like “lock and key” What happens after? What factors affect enzyme function?
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