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Applying False Discovery Rate (FDR) Control in Detecting Future Climate Changes ZongBo Shang SIParCS Program, IMAGe, NCAR August 4, 2009
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North American Regional Climate Change Assessment Program (NARCCAP) Predicted Changes in Future Winter Temperature ( °C) Note: This figure shows the difference between the mean of future (2040 – 2069 ) winter temperature vs. current (1970 – 1999) winter temperature.
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Can We Trust What We See? Note: Those two figures show the means of 10 replicate random fields that are generated from the same Matèrn semi-variogram model, but with different random seeds.
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What’s the Problem with Pointwise Two-sample t Tests?
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False Discovery Rate (FDR) Control FDR controls the expected proportion of incorrectly rejected null hypotheses (type I errors) among the rejected null hypotheses. Less conservative than Bonferroni procedures, with greater power than Familywise Error Rate (FWER) control, at a cost of increasing the likelihood of obtaining type I errors. Applications of FDR in Genes Expression and Microarray Applications of FDR in Functional Magnetic Resonance Imaging
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Definition of False Discovery Rate Declared non- significant (fail to reject) Declared significant (reject) Total True null hypotheses UVm₀ Non-true null hypotheses TSm-m₀ m-RRm Let Q = V / (V + S) define the proportion of errors committed by falsely rejecting null hypotheses. Notice Q is an unobservable random variable. Define the FDR to be the expectation of Q:
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False Discovery Rates for Spatial Signals Testing on clusters rather than individual locations Procedure 1: Weighted Benjamini & Hochberg (BH) procedure Procedure 2: Weighted two-stage procedure Procedure 3: Hierarchical testing procedure – Testing stage: control FDR on clusters – Trimming stage: control FDR on selected points Reference: Benjamini, Y. and Heller, R. 2007. False discovery rates for spatial signals. Journal of the American Statistical Association. 102:1272-1281.
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Simulation Studies 1. Random Fields 2. Random Field Block 3. Random Field Gradient
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Simulation Study I: Two Random Fields Note: Those two figures show the means of 10 replicate random fields that are generated from the same Matèrn semi-variogram model, but with different random seeds.
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Pre-defined Clusters
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Simulation Study 1: Pointwise vs. False Discover Rate Control
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9 Repeats on Simulation Study I
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Simulation Study II: Pre-defined Block Trend 4-10 10-4 2 -2
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Simulation Study II: Average of 10 Replicates Random Field (Matèrn, σ = 0.4) + Block Trends 4-10 10-4 2 -2
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Simulation Study II: Pointwise vs. False Discover Rate Control
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9 Repeats on Simulation Study II
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Study III: Pre-defined Gradient Trend
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Study III: Average of 10 Replicates Random Field (Matèrn, σ = 2) + Gradient Trends
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Simulation Study III: Pointwise vs. False Discover Rate Control
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9 Repeats on Simulation Study III
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Applying FDR Control for Detecting Future Climate Changes Download climate datasets from NARCCAP program Calculate seasonal average Construct clusters from EPA Eco-regions Conduct two-sample t test on temperature/precipitation Pointwise p-values and corresponding z scores Build semi-variogram model to estimate spatial autocorrelation Calculate z score and p-value by cluster Reject clusters based on FDR control
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http://www.epa.gov/wed/pages/ecoregions/na_eco.htm GIS: Vector Dataset, Lambert Equal-Area Projection
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61 regions rejected at q=0.25 level 56 regions rejected at q=0.1 level 54 regions rejected at q=0.05 level 51 regions rejected at q=0.01 level H 0 : Future Winter Temperature Increase by 3 ˚C
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H 0 : Winter Temperature ↑ 1 ˚CH 0 : Winter Temperature ↑ 2 ˚CH 0 : Winter Temperature ↑ 3 ˚C H 0 : Winter Temperature ↑ 4 ˚CH 0 : Winter Temperature ↑ 6 ˚CH 0 : Winter Temperature ↑ 5 ˚C FDR Tests on Winter Temperature
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H 0 : Winter Prec ↓ 20 Kg/ m²H 0 : ↓ 10 Kg/ m²H 0 : ↑ 10 Kg/ m²H 0 : ↑ 20 Kg/ m² H 0 : ↑ 50 Kg/ m²H 0 : Winter Prec ↑ 30 Kg/ m²H 0 : ↑ 75 Kg/ m²H 0 : ↑ 100 Kg/ m² FDR Tests on Winter Precipitation
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Acknowledgement Dr. Steve Sain, IMAGe, NCAR Drs. Douglas Nychka, Tim Hoar, IMAGe, NCAR Dr. Armin Schwartzman, Harvard University University of Wyoming SIParCS, IMAGe, NCAR NARCCAP
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