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Disease Detectives B/C
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What is Disease Detectives? Epidemiology: Study of health/sickness of populations Includes Public Health Surveillance –Data collection for prevention and control of illness Uses scientific study methods –Heavy emphasis on data analysis
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The event B/C events similar in content C has more math, vocab, evaluation of research design Nonprogrammable calculators (absolutely essential) One sheet of notes This year’s focus: population growth
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Event format 2-3 data sets on public health problems Mostly short answer/fill in questions Multi-point math problems –Show work for partial credit! Matching/multiple choice for vocab Essays, long reading passages? –“ten steps to investigating an outbreak”
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Population growth ????? Diseases of dense populations –Cholera, dysentery, influenza, typhoid, polio Encroachment into disease reservoirs –Sleeping sickness, Marburg virus –Ebola! Some general knowledge may be expected, especially of ebola
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Background info Virus, bacteria, parasite – life cycles modes of transmission Immunity: active, passive, herd Epidemic, pandemic, endemic Case definition: person, place, time Epidemiological triad: agent, host, environment John Snow’s cholera study
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Statistics Prevalence: #of existing cases at a given time (or period) Incidence: # of new cases in a period of time Both usually expressed as rates (e.g., per 1,000 pop.) –For incidence, person/time may be used (e.g., person/year) Attack rate: cases/exposed pop. Case fatality rate: CSD/cases
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2x2 tables Disease +Disease - Exposure +# of people = a# of people = bRow sum = a+b Exposure -# of people = c# of people = dRow sum = c+d Column sum = a+c Column sum = b+d Total = a+b+c+d = n
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Statistics: Relative Risk Technically, Relative Risk includes Risk Ratio, Rate Ratio and Odds Ratio Usually, Relative Risk = Risk Ratio Risk = # of cases/population Risk Ratio = risk in pop. of interest / control group risk preferably RR = exposed/unexposed, but may use baseline risk (whole pop.)
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Odds Ratio Odds of outcome in pop. 1 odds of outcome in pop.2 = postives in pop. 1 negatives in pop. 1 divided bypositives in pop. 2 negatives in pop. 2 Or, by invert and multiply pos. in pop.1 X neg. in pop. 2 neg. in pop. 1 X pos. in pop.2
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Research methods Case/control study: compare cases to some group of unaffected persons –Cannot use RR b/c no true baseline Cohort study: tracks population over time, compares to some baseline –Can use RR –May be prospective or retrospective Experimental methods –Basically limited to randomized clinical trials of treatments, supplements etc.
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Example: Nurses’ health study Cohort study (prospective), so RR is applicable RR = 411/39242 / 596/74068 RR = 1.30 Breast Cancer + No Breast Cancer Totals Ever smoked4113883139242 Never Smoked5967347274068 Totals1007112303113,310
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Example 2: Hip fractures case/control study, so must use OR OR = 60/20 / 579/213 or 60*213 / 20*579 = 1.1 # of months on hormone replacement therapy Hip fracture patients (Cases) Sample of other patients (controls)Totals > 660579639 < 620213233 Totals80792872
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Evaluating design: C 1.Random error - Avoidable with larger sample 2. Systematic error a.Selection (sample) bias - Controls may not represent population b.Recall bias \ c.Response bias | information bias d.Interviewer bias /
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Stratified Analysis (C) Simpson Paradox: Sometimes a relationship that is true for a large group is not true for any subset of that group Stratified analysis looks at subgroups (strata) Most common: age adjustment Direct method: weight events /(e.g. deaths) by standard pop. Indirect method: apply standard rate to obtain expected events
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Mantel-Haenstzel
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Epi curves: point source Single peak, <1 incubation period Single environmental source; no PTP Example: transient environmental agents, most food contamination
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Continuous common source One peak or declining peaks, >1 IP Ongoing environmental exposure; no PTP Example: persistent environmental agents, waterborne pathogens (cholera)
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Progressive source (aka Propagated) Multiple, often successively higher peaks >1 IP Person-to person transmission Example: communicable diseases (MRSA, flu)
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Line Listing Signs/SymptomsLabDemographics Case #Report Date Onset Date Physician Diagnosis NVJHAIgMSexAge 110/12/0210/5/02Hepatitis A1111M37 210/12/0210/4/02Hepatitis A1011M62 310/13/0210/4/02Hepatitis A1011M38 410/13/0210/9/02NA000 F44 510/15/02 10/13/02Hepatitis A1101M17 610/16/0210/6/02Hepatitis A0011F43
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SIR Graph susceptible, infected, recovered (removed)
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Links Free online introductory textbook from the CDC: http://www.ihs.gov/MedicalPrograms/PortlandInjury/PDFs/PrinciplesOfE pidemiologyInPublicHealthPractice.pdf http://www.ihs.gov/MedicalPrograms/PortlandInjury/PDFs/PrinciplesOfE pidemiologyInPublicHealthPractice.pdf Another, from Canada: http://phprimer.afmc.ca/inner/primer_contents CDC’s DD site: http://www.cdc.gov/excite/disease_detectives/index.htmhttp://www.cdc.gov/excite/disease_detectives/index.htm Weekly reports from CDC: http://www.cdc.gov/mmwr/http://www.cdc.gov/mmwr/ Excellent series from UNC: http://cphp.sph.unc.edu/focus/http://cphp.sph.unc.edu/focus/ Nice explanation of odds ratio & relative risk: http://www.childrens- mercy.org/stats/journal/oddsratio.asphttp://www.childrens- mercy.org/stats/journal/oddsratio.asp Adjusted rates: ocw.jhsph.edu/courses/fundepi/PDFs/Lecture7.pdf Mantel-Haenszel: https://wiki.ecdc.europa.eu/fem/w/fem/the-mantel- haenszel-method.aspxhttps://wiki.ecdc.europa.eu/fem/w/fem/the-mantel- haenszel-method.aspx Glossaries: http://www.cdc.gov/reproductivehealth/EpiGlossary/glossary.htm#C http://www.ispub.com/ostia/index.php?xmlFilePath=journals/ijpn/vol3n1/ glossary.xml http://www.cdc.gov/reproductivehealth/EpiGlossary/glossary.htm#C http://www.ispub.com/ostia/index.php?xmlFilePath=journals/ijpn/vol3n1/ glossary.xml
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