1. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Searching and Accessing Full Text Journal Articles Nancy Clark, Director of Medical Informatics Susan Epstein, Public Services Librarian FSU College of Medicine Summer 2011 1

2. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Objectives for Session Learners will – Do PubMed search using primary functions – Use the new interface – Locate full articles from PubMed search – Perform Google Scholar Search – Save searches in NCBI Summer 20112

3. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Handouts PowerPoint Worksheet for activity Evaluations – Please complete Pre- Workshop Assessment Summer 20113

4. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Tutorials for PubMed Summer 20114 Link to PubMed Tutorials

5. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care What is MEDLINE? Database of bio-medical journals (medical, dental, nursing, veterinary, …) Old Index Medicus database Service of National Library of Medicine (NLM) 5,271 biomedical journals, most are peer reviewed Nearly 18+ million citations (around 70,000 new/month) Back to 1860s (primarily back to 1950s) Summer 20115

6. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 6 What is MEDLINE? Articles are indexed by Real People. Terms are assigned that come from a Controlled Vocabulary (Thesaurus) called MeSH (Medical Subject Headings). MeSH includes sets of subheadings that apply to each term and uses markers to indicate which terms reflect the main focus of the article. Summer 20116

7. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Where to Search MEDLINE? Pubmed (NLM interface) OVID MD Consult Merck Medicus Medscape Links to – Full text journal articles – Books – EBM databases Summer 20117

8. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Goal of Journal Search A Few Good Articles Summer 20118 Full text in as few clicks as possible

9. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Go to PubMed (EZProxy) Under MedResources List Click on Pubmed Summer 20119

10. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Alternate Option Use Search Engine Box to start Pubmed Search Type in Terms and start Search Summer 201110

11. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer 201111

12. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Get a Free NCBI Account. Why? Alerting service – Sends TOC of latest journals – Sends results of searches updates Save searches Save collections of articles Filters which break down your results for you Summer 201112

13. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care First search of the evening: Author search Use initial(s) most frequently used by author After 2002, full names (when included in the journal itself) may be used May search multiple authors on one search line Summer 201113

14. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Example of author search: Search for articles by Hurt MM and click the “Search” button Summer 201114

15. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Let’s take a look at one article Summer 201115

16. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer 201116 Abstract View

17. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care MeSH Terms Summer 201117

18. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care MEDLINE View Summer 201118

19. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer 201119 Direct Link to Full Text:

20. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Do your own author search exercise Lawrence Weed (LL Weed) Nir Menachemi Robert Brooks (RG Brooks) Summer 201120

21. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care PubMed tutorial 1 minute tutorial on a simple subject search Note Advanced Search > Details screen to understand the PubMed search engine in one picture! Summer 201121

22. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Subject Search Summer 201122

23. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer 201123

24. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer 201124

25. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Limits Results Summer 201125

26. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer 201126 Details – scroll down

27. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer 201127

28. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Search Strategies Limit search – By type of article – By date – By age group – By language Phrases in quotes: “focal nodular hyperplasia” AND, OR, NOT, parentheses Summer 201128 “medication errors” AND “quality improvement” NOT (ambulatory OR “nursing home”)

29. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Types of Articles Editorials Letters Review Articles Meta-Analysis – Systematic reviews Clinical Guidelines Original Research – Case Studies – Case Control – Time Series – Cross sectional – Cohort – Control trials – Randomized Control Trials Summer 201129

30. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Advanced Search Summer 201130

31. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Using Your Search History Summer 201131

32. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer 201132 Put a reference in the Clipboard

33. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Clipboard As you search Add articles to Clipboard Collect all the good articles there Summer 201133

34. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Email Clipboard Summer 201134

35. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Follow the link to the article Summer 201135

36. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care When you see this… Summer 201136

37. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer 201137

38. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care When the pretty red button isn’t there…. Summer 201138

39. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Identify the Full Journal Title Summer 201139

40. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Finding Full Text Articles Pubmed Linked to full text? No… 1.Medical E-Journals list from library webpage? Not listed…Medical E-Journals 2.FSU E-Journals from library webpage. In electronic format? No...FSU E-Journals 3.Interlibrary loans for titles not owned by FSU: MedLibrary@med.fsu.eduMedLibrary@med.fsu.edu Summer 201140

41. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care All FSU E-Journals Under Resources Expand E-Journals Click on All FSU E-Journals Summer 201141

42. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care FSU Libraries E-Journals Summer 201142

43. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Interlibrary Loan Summer 201143

44. Finding Journal Articles at FSU Summer 201144

45. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Endnote X2 $100 Software free to all faculty Manages articles Create libraries of articles by topic Cite and format bibliography in papers/articles Contact librarians if interested Summer 201145

46. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Google Scholar Searches Pubmed, some of our content, links to full text In Search Engines box Great for finding articles Can’t save searches or email searches Summer 201146

47. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer 201147

48. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Saving Articles Summer 201148

49. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summer 201149 Find it @ FSU Link goes to Serials Solutions Link goes to FSU Online Catalog

50. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Exercise Write a clinical question What kinds of articles do you want to answer this question Locate first 10 articles on search Find the full text articles Print one of the full text articles Summer 201150

51. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Open exercises: topics from group Summer 201151

52. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Review of great features Details Limits Advanced Search – History (combine searches) Related articles View in Abstract View to find full article Use NCBI to save searches Summer 201152

53. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Using NCBI Register and get a Username and Password 53 Summer 2011

54. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Why get NCBI Account? Save searches Save citations in My Bibliography Automatically update and e-mail search results from your saved searches Filter search results Highlighting search terms 54Summer 2011

55. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 55Summer 2011

56. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care My NCBI 56Summer 2011

57. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 57 57 Customize My NCBI Tutorials: http://www.nlm.nih.gov/bsd/disted/myncbi.html http://www.nlm.nih.gov/bsd/disted/myncbi.html Saving Searches Saving References Customizing the Tabs Highlighting Search Terms Summer 2011

58. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 58 My NCBI – Saving a Search Develop a search. Click on ‘Save Search’. April 29, 2008 Medical Informatics Seminar Session 6 58 Summer 2011

59. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 59 My NCBI – Saving a Search Give name and Save Complete form for email notification ‘My NCBI’ puts the search in your list. Summer 2011

60. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care April 29, 2008 Medical Informatics Seminar Session 6 60 My NCBI – Saving References (1) Develop a search. Check the references you want to save. Click on ‘Send To’ and select ‘Clipboard’. 60 Summer 2011

61. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 61 My NCBI – Saving References (2) Go to the ‘Clipboard’ Click on ‘Send To’ and select Collections. Summer 2011

62. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 62 My NCBI – Saving References (3) Tell My NCBI what to call the collection Or Append to an existing collection April 29, 2008 Medical Informatics Seminar Session 6 62 Summer 2011

63. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 63 63 My NCBI – Saving References (4) To see the collection or saved search, click on ‘My NCBI’ > Collections Can download collections into a reference manager such as EndNote or RefWorks. Summer 2011

64. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 64 My NCBI – Customizing the Filters 1.Click on ‘My NCBI’ 2.‘Manage Filters’ Summer 2011

65. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 65 My NCBI – Customizing the Filters Try “Browse Filters” to see different types Summer 2011

66. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 66 My NCBI – Highlighting Search Terms Click on ‘NCBI Site Preferences’. Click on ‘Highlighting’ Pick colors Summer 2011

67. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Have Journal Contents Sent (1) 1.Search ‘Journals Database’ 2.Enter a general subject term, e.g. “Pediatrics”, then ‘Go’. 3.Click on a journal title to get information about that journal. 4.Continue with another search for a Journal, find and select 5.Click on ‘Send to’ and select ‘Search Box with OR’. 67Summer 2011

68. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 68Summer 2011

69. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 69 Have Journal Contents Sent (2) 4.Click on ‘Search PubMed’. 5.Click on ‘Save Search’, name it, and set up email as earlier. 6.You will be notified when new articles are published in these journals. Summer 2011

70. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care 70 Links to Other NCBI Databases NCBI has other databases that link to PubMed. (examples: CoreNucleotide, Gene, HomoloGene, Protein, Protein) 70 Summer 2011

71. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care Summary Use Pubmed to Search for Articles on your topics, My NCBI to manage Use red FSU button to find articles If no button: eJournals list > Serial Solutions > Interlibrary loan Any journal article you need, we will get Summer 201171

72. T HE F LORIDA S TATE U NIVERSITY C OLLEGE OF MEDICINE Educating and developing exemplary physicians who practice patient-centered health care The End Practice Call or e-mail us for individual help 850-644-3883 MedLibrary@med.fsu.edu Summer 201172