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Genetic Mapping (Chapt. 5)

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Presentation on theme: "Genetic Mapping (Chapt. 5)"— Presentation transcript:

1 Genetic Mapping (Chapt. 5)
Basic Principles Genes, RFLPs, SNPs Meiosis, Independent Assortment, Linkage and Crossing Over Genetic Mapping in Experimental Organisms Two- and Three-point crosses Complementation Analysis Genetic Mapping in Humans Pedigree Analysis

2 Gametes (haploid cells) Fig. 2-8

3 Crossing Over Occurs Between DNA of Homologous Chromosomes
Paternal Maternal Paired Homologous Chromosomes A a b B aB Ab

4

5 Genetic Map of Drosophila
Fig. 5-14

6 Drosophila melanogaster (Fruit Fly)

7 Drosophila melanogaster (Fruit Fly)
Phenotypes eye color body color wing shape antenna length bristle pattern

8 Dominant Allele (WT) Recessive Allele Gene Name se+ se cu+ cu sr+ sr
Sepia Eyes cu+ cu Curled Wings sr+ sr Striped Body jv+ jv Javelin Bristles

9 Single Crossover (SCO)
Paternal Paired Homologous Chromosomes Maternal

10 Double Crossover (DCO)
Paternal Paired Homologous Chromosomes Maternal DCO Products

11 Pedigree for Inheritance of Blood Type and Nail-Patella Syndrome

12 Pedigree for Mapping of
HD and a DNA Marker I Gel Electrophoresis

13 Pedigree for Mapping of
HD and a DNA Marker I II Gel Electrophoresis

14 February 2007 1168 Family Pedigrees with at least two individuals with Autism Spectrum Disorder

15 Chromosome 11 Band 11q13 ~ 2 cM M L ASD orf1 orf2 orf3 orf4
~ 500,000 bp Band 11q13

16 Neurexin Proteins

17 Population Genetics (Chapter 27)
Mendelian Genetics Applied to Populations The Hardy-Weinberg Equation (p2 + 2pq + q2) Test populations for microevolution Mutation rate in humans Estimate frequency of carriers for recessive genetic disorders Assess effect of natural selection on microevolution Assess effect of inbreeding DNA Profiling (“DNA fingerprinting”)

18 HIV-1 Structure (Gp120)

19 HIV Infection Pathway HIV-1 Extra-cellular Space Gp120 CD4 Membrane
CCR5 Cytosol

20 HIV Infection Pathway HIV-1 Extra-cellular Space Gp120 CD4 Membrane
CCR5 Cytosol Protein encoded by CCR5-1 allele (CCR5-1 / CCR5-1 or CCR5-1 / CCR5-∆32)

21 CCR5 RFLP CCR5-1 CCR5-∆32

22 CCR5 Genotype Analysis Fig. 25-3

23 CCR5-∆32 Allele Frequency
Fig. 25-4

24 Assumptions of the Hardy-Weinberg Equation
Individuals of all genotypes have equal rates of survival and reproductive success (no selection). No new alleles are created or converted from one allele to another by mutation. Individuals do not migrate into or out of the population (no gene flow). The population is infinitely large (no genetic drift). Individuals in the population mate randomly (no inbreeding) Page 713

25

26 Fibroblast Growth Factor 3 (FGFR3) Receptor
Achondroplasia Mutations: G (Gly to Arg) C

27 FGFR3 Signal Transduction Pathways

28 LYSOSOMAL DEGREDATION
DELAYED LYSOSOMAL DEGREDATION

29 FGFR3 Signal Transduction Pathways

30 Effect of Selection on Allele Frequency
Fig. 27-7

31 Changes in CCR5-∆32 Allele Frequency
Fig. 27-8

32 Chromosome 7 VNTR-D VNTR-C VNTR-B VNTR-E VNTR-F VNTR-A

33 Tandem Repeat Locus (a.k.a VNTR, STR, Microsatellite)
GTCTAG GTCTAG GTCTAG GTCTAG CAGATC CAGATC CAGATC CAGATC (a.k.a VNTR, STR, Microsatellite)

34 7M 7P 7M 7P GTCTAG GTCTAG GTCTAG CAGATC CAGATC CAGATC
VNTR-D VNTR-C VNTR-B VNTR-E VNTR-F VNTR-A 7M 7P 7M GTCTAG GTCTAG GTCTAG CAGATC CAGATC CAGATC GTCTAG GTCTAG GTCTAG GTCTAG CAGATC CAGATC CAGATC CAGATC 7P

35 RFLP Analysis of VNTR Loci
Fig


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